prot_H-canaliculatus_F_contig12361.2009.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12361.2009.1
Unique Nameprot_H-canaliculatus_F_contig12361.2009.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length68
Homology
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5KMJ1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ1_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.280e-14
Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F TNNLG+   F G
Sbjct:  339 NGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTNNLGECQWFDG 403          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.480e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:   50 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 114          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.820e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G E CK DPCVFRK+ DG VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:   42 NGFEPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDG 106          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5K5G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G1_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.230e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:  311 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 375          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.010e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:  129 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 193          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5KSR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR8_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.010e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:   73 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 137          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.230e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:  193 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 257          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5JUB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB8_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.370e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:  415 NGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 479          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.430e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:  541 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 605          
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.450e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    3 HGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVLNEDFTTNNLGKLSLFTG 67
            +G EQCK DPCVFRK+ D  VV+I+V++VDD+ VAG D +  EL A LN+ F T NLG+   F G
Sbjct:  497 NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDG 561          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12361.2009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMJ1_9PHAE1.280e-1456.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRS6_9PHAE1.480e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L663_9PHAE3.820e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5G1_9PHAE7.230e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVD4_9PHAE8.010e-1455.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSR8_9PHAE8.010e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE8.230e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUB8_9PHAE8.370e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K164_9PHAE8.430e-1455.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQN6_9PHAE8.450e-1455.38Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12361contigH-canaliculatus_F_contig12361:2094..2297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12361.2009.1mRNA_H-canaliculatus_F_contig12361.2009.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12361 2070..2341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12361.2009.1 ID=prot_H-canaliculatus_F_contig12361.2009.1|Name=mRNA_H-canaliculatus_F_contig12361.2009.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=68bp
MRHGMEQCKTDPCVFRKIRDGRVVVILVVHVDDMAVAGEDNEVLELHAVL
NEDFTTNNLGKLSLFTG*
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