prot_H-canaliculatus_F_contig12300.1975.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12300.1975.1
Unique Nameprot_H-canaliculatus_F_contig12300.1975.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length78
Homology
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: D7FP55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP55_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 6.640e-42
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGAEAAEE 76
            LGLLEGK VADIREQL+QDYKSTMLANWGVFVPAAV+NLAFCPPELRVLFLNVVFFGWTIFLSTVVSKG  EA EE
Sbjct:  121 LGLLEGKAVADIREQLNQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEE 196          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A6H5L0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V0_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 9.060e-42
Identity = 71/76 (93.42%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGAEAAEE 76
            LGLLEGK VADIREQLDQDYKSTMLANWGVFVPAAV+NLAFCPPELRVLFLNVVFFGWTIFLSTVVSKG  EA EE
Sbjct:  196 LGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEE 271          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A7S3PZB9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.290e-26
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGAEAAEE 76
            LGLLEGK+ +D++EQLD+DYK TM ANW ++VPA  +N+AFCPP LRVLFLN VFF W+IFLS  ++  G EA +E
Sbjct:  184 LGLLEGKSASDVKEQLDRDYKDTMFANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNSDGEEAPKE 259          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A7R9W596_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W596_9STRA)

HSP 1 Score: 102 bits (255), Expect = 4.200e-25
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 68
            LGLLEGKT   I+ QLD+DYK TMLANW ++VPA V+N+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:  187 LGLLEGKTTDAIKSQLDEDYKDTMLANWKLWVPATVVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 254          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: B8BXV6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV6_THAPS)

HSP 1 Score: 100 bits (248), Expect = 1.040e-24
Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 68
            LG LEGKTV +I++QLD DY  TMLANW ++VPA  +N+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:  124 LGFLEGKTVEEIKKQLDDDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 191          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A7S2W2E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2E8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.250e-24
Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 68
            LGLLEGKT+  +++QLD DYK TM+ANW ++VPA  +N+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:  169 LGLLEGKTMESVKQQLDNDYKDTMIANWKLWVPATAVNIAFCPPLLRVLFLNCVFFFWSIFLSLKLNK 236          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A835YN24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN24_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.180e-24
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVS---KGGAEAAEE 76
            LGLLEGK++A+++++L++ Y STM+ANW +++PA+ +NLAFCPP LRVLF NVVFF W+IFLS VV+   K   EAA +
Sbjct:  117 LGLLEGKSLAEVKQKLNESYGSTMIANWKLWIPASFVNLAFCPPPLRVLFTNVVFFCWSIFLSIVVNAPQKDTEEAASD 195          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A7R9ZUR5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZUR5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 8.010e-24
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 68
            LGLLEGKTV  I++QL+ DY  TMLANW ++VPA V+NLAF PP LRVL+LN VFF W+IFLS  ++K
Sbjct:   25 LGLLEGKTVDSIKQQLEDDYTDTMLANWKLWVPATVVNLAFVPPILRVLYLNCVFFFWSIFLSLKLNK 92          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: A0A7S1YNW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNW0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.540e-23
Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 68
            LG+LEGK++  I+EQLD+DY  TMLANW ++VPA  +N+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:  204 LGVLEGKSLDSIKEQLDEDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 271          
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Match: K0R1J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1J6_THAOC)

HSP 1 Score: 98.2 bits (243), Expect = 2.440e-23
Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 68
            LG LEGKT  +I++QLD DYK TM+ANW ++VPA  +N+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:  184 LGFLEGKTSEEIKQQLDDDYKDTMIANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNK 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12300.1975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP55_ECTSI6.640e-4292.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0V0_9PHAE9.060e-4293.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3PZB9_9STRA1.290e-2663.16Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9W596_9STRA4.200e-2570.59Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8BXV6_THAPS1.040e-2467.65Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2W2E8_9STRA4.250e-2464.71Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A835YN24_9STRA6.180e-2458.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9ZUR5_9STRA8.010e-2466.18Hypothetical protein n=1 Tax=Pseudo-nitzschia aren... [more]
A0A7S1YNW0_9STRA1.540e-2366.18Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0R1J6_THAOC2.440e-2364.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 2..63
e-value: 1.2E-21
score: 76.6
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 1..67
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 1..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..42
NoneNo IPR availableTMHMMTMhelixcoord: 48..67
NoneNo IPR availableTMHMMTMhelixcoord: 24..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12300contigH-canaliculatus_F_contig12300:2845..3712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12300.1975.1mRNA_H-canaliculatus_F_contig12300.1975.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12300 2845..3712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12300.1975.1 ID=prot_H-canaliculatus_F_contig12300.1975.1|Name=mRNA_H-canaliculatus_F_contig12300.1975.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=78bp
LGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVINLAFCPPELRVLF
LNVVFFGWTIFLSTVVSKGGAEAAEEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22