prot_H-canaliculatus_F_contig1230.1974.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1230.1974.1
Unique Name	prot_H-canaliculatus_F_contig1230.1974.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	201

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1230.1974.1 vs. uniprot
Match: D7G090_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G090_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.260e-50
Identity = 117/208 (56.25%), Postives = 139/208 (66.83%), Query Frame = 0

Query:    1 MSATYETLLTPATCVASDDEMCKSREGVRQSRGRKSG-FEKRSPQHDL--TAKTATKGTGKR---GPAEVTDKKRAKTSNVVKRAIHKMKKKSSKGSASSTRTPPSSAGD-IDTAPPKVEDLGIDPRLLEKWMARKELRKQGAVAGEHQL-ASRHAATLVVVGLSSGSLAWTKDRIRSLIQAHGVALAVCLVITAVAMACTLMLSRCS 200
            MS    TLLTPATCVASDD+M  S+ G R  RGR SG F KRS   DL  T+KT            PA   DK+RAKTSN++KRA+HK+ K                    +   PPK+++LGIDPRLLEKW ARKEL+KQGAVAG   + ASR  ATLV+VGLSSGSL WTK+RIR+  QAHGV LA+C++I AVA+ACTL+LSRCS
Sbjct:    1 MSKYDSTLLTPATCVASDDDMTMSQAGGRH-RGRWSGRFGKRSSHKDLLLTSKTPXXXXXXXITSDPAADIDKRRAKTSNIIKRAVHKINKXXXXXXXXXXXXXXXXXXXXVSEEPPKIDELGIDPRLLEKWKARKELKKQGAVAGGRPVSASRGTATLVMVGLSSGSLVWTKERIRTWSQAHGVLLALCVLIAAVAIACTLILSRCS 207

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1230.1974.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1230.1974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G090_ECTSI	1.260e-50	56.25	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 197..200
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 177..196
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..176
None	No IPR available	TMHMM	TMhelix		coord: 175..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1230	contig	H-canaliculatus_F_contig1230:26110..28686 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1230.1974.1	mRNA_H-canaliculatus_F_contig1230.1974.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1230 26110..28686 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1230.1974.1 ID=prot_H-canaliculatus_F_contig1230.1974.1|Name=mRNA_H-canaliculatus_F_contig1230.1974.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=201bp
MSATYETLLTPATCVASDDEMCKSREGVRQSRGRKSGFEKRSPQHDLTAK
TATKGTGKRGPAEVTDKKRAKTSNVVKRAIHKMKKKSSKGSASSTRTPPS
SAGDIDTAPPKVEDLGIDPRLLEKWMARKELRKQGAVAGEHQLASRHAAT
LVVVGLSSGSLAWTKDRIRSLIQAHGVALAVCLVITAVAMACTLMLSRCS
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