prot_H-canaliculatus_F_contig12296.1963.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12296.1963.1
Unique Nameprot_H-canaliculatus_F_contig12296.1963.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length137
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12296.1963.1 vs. uniprot
Match: D7G174_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G174_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 7.490e-26
Identity = 55/91 (60.44%), Postives = 73/91 (80.22%), Query Frame = 0 
Query:   33 TRKYKISSKGHLPPGWKVKRIEQAEKHRGYACRWYVYKHGKRSGLQDLKFKNLRDVQDFLNSDQPGAEAHRRAMDEAQQGGQGEASAETAE 123
            T++Y+ISS  +LPPGW++ R +Q EK+ GYACRWYVYK+GK S L +LKFKNLRDV+DF++SD PGA+ HRRAM++ ++  Q EAS   AE
Sbjct:  869 TKRYRISSSSNLPPGWEIIRSKQPEKNNGYACRWYVYKYGKGSNLPNLKFKNLRDVEDFVHSDLPGAKIHRRAMEKRKR--QTEASMHCAE 957
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BLAST of mRNA_H-canaliculatus_F_contig12296.1963.1 vs. uniprot
Match: A0A6H5JIC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC2_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.100e-24
Identity = 52/89 (58.43%), Postives = 70/89 (78.65%), Query Frame = 0 
Query:   35 KYKISSKGHLPPGWKVKRIEQAEKHRGYACRWYVYKHGKRSGLQDLKFKNLRDVQDFLNSDQPGAEAHRRAMDEAQQGGQGEASAETAE 123
            +Y+ISS  +LPPGW++ R +Q EK++ YACRWYVYK+G  S L DLKFKNLRDV+DF++SD PGA+ HRRA+++ ++  Q EAS   AE
Sbjct:  888 RYRISSSSNLPPGWEIIRSKQPEKNKAYACRWYVYKYGNGSNLPDLKFKNLRDVEDFVHSDLPGAKIHRRALEKRKR--QTEASVHCAE 974
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12296.1963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G174_ECTSI7.490e-2660.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIC2_9PHAE3.100e-2458.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 20..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12296contigH-canaliculatus_F_contig12296:137..1558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12296.1963.1mRNA_H-canaliculatus_F_contig12296.1963.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12296 135..1558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12296.1963.1 ID=prot_H-canaliculatus_F_contig12296.1963.1|Name=mRNA_H-canaliculatus_F_contig12296.1963.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp
CGGGGNGVTDSVVQVTKGSDSSASTSVSTTASTRKYKISSKGHLPPGWKV
KRIEQAEKHRGYACRWYVYKHGKRSGLQDLKFKNLRDVQDFLNSDQPGAE
AHRRAMDEAQQGGQGEASAETAESSTPPKKKRKKERR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf