prot_H-canaliculatus_F_contig1229.1960.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1229.1960.1
Unique Nameprot_H-canaliculatus_F_contig1229.1960.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length301
Homology
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A6H5KZU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU7_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 6.350e-151
Identity = 235/301 (78.07%), Postives = 260/301 (86.38%), Query Frame = 0
Query:    1 MASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAA-DDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGDHD 300
            MAS DGWWN+++R+W A+    AD R RR   GTGAA SPLVVE +  D A +DGD  ASEEKEL+ KV+ EPVP+TIAALKNHH YVLGK LLKFEALRPGAKAAGLVKGSKVYLKTDVA LRGASRWKKDALQV+KSEL KPVK+ATKKGEK+GEGTSKLYGDWQTEPW PEAA +GKVPKNEYGN+EFFD SPAFLP GT H+RG+QI R+AAKLGVD+APALTGFETK GRQVPVLDGIIVCKEQ QMLRDAH  W+Q  LEK+ K RG++VLRRWRTL +GVLLGAQLLEEYG H+
Sbjct:  743 MASADGWWNRSMRKWGAS----ADRRSRRKVIGTGAASSPLVVEGQRDDEANEDGDQGASEEKELQEKVDKEPVPNTIAALKNHHKYVLGKKLLKFEALRPGAKAAGLVKGSKVYLKTDVATLRGASRWKKDALQVKKSELDKPVKLATKKGEKEGEGTSKLYGDWQTEPWAPEAAVDGKVPKNEYGNLEFFDCSPAFLPTGTAHLRGEQIGRLAAKLGVDYAPALTGFETKVGRQVPVLDGIIVCKEQSQMLRDAHMTWQQMQLEKQVKVRGERVLRRWRTLFKGVLLGAQLLEEYGSHE 1039          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: D8LJY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY2_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 1.050e-140
Identity = 224/301 (74.42%), Postives = 248/301 (82.39%), Query Frame = 0
Query:    1 MASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAA-DDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGDHD 300
            MAS DGWWN++LR+W A+    A                PLVVE    D A +D D  A EEKEL+ KV+NEP+P+TIAALKNHH YVLGK LLKFEALRPGAKAAGLVKGSKVYLKTDVA LRGASRWKKDALQV+KSEL KPVK+ TKKGEK+G+GTSKLYGDWQTEPW PEAA +GKVPKN+YGNVEFFD SPAFLP GT H+RG+QI R+AAKLGVD+APALTGFETK GRQVPVLDGIIVCKEQ QMLRDAH  W+Q+ LEK+ KAR Q+VLRRWRTL +GVLLGAQLLEEYG HD
Sbjct:  695 MASADGWWNRSLRKWGAS----AHRXXXXXXXXXXXXXXPLVVEGHGDDEANEDDDQGAIEEKELQEKVDNEPIPNTIAALKNHHKYVLGKKLLKFEALRPGAKAAGLVKGSKVYLKTDVATLRGASRWKKDALQVKKSELEKPVKLTTKKGEKEGDGTSKLYGDWQTEPWAPEAAVDGKVPKNDYGNVEFFDCSPAFLPTGTAHLRGEQIGRLAAKLGVDYAPALTGFETKVGRQVPVLDGIIVCKEQSQMLRDAHMTWQQTQLEKQVKARRQRVLRRWRTLFKGVLLGAQLLEEYGSHD 991          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A1Y1I3Q9_KLENI (Transglutaminase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3Q9_KLENI)

HSP 1 Score: 173 bits (438), Expect = 6.690e-45
Identity = 101/261 (38.70%), Postives = 145/261 (55.56%), Query Frame = 0
Query:   53 DGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIAT-----------------KKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEY 296
            D D +A E+ E+E +   EP+P+   A K+HH+Y L + L K++ L P     G   G  VY +T V  L  A RW ++  +V++  L  PVK+                   ++GE++G  TS L+G WQT+ W P  A NG+VP+NE G V+ +D S  FLP GTVH+R  +I +VA  L VD+APA+ GFE + GR VP  DGI++CKE    + D +   EQ L  +  + R Q+  +RWR L + V L  +L   Y
Sbjct:  885 DDDRAAREDVEMETRTLTEPLPTNQQAYKSHHLYALERWLTKYQVLHPKGPVLGYCAGQPVYPRTSVQVLHTADRWLREGRKVQRGSL--PVKVLRTSKLASASEAAEQAALGEEGEEEG-ATSALFGRWQTDAWRPPPARNGRVPRNERGQVDVWDES--FLPKGTVHLRYPRILQVARMLKVDYAPAMVGFEVRGGRSVPKFDGIVICKEYESQVLDVYLEEEQRLHARELRKREQEAAQRWRQLLKAVALRQRLRTTY 1140          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: W2QJ20_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2QJ20_PHYPN)

HSP 1 Score: 170 bits (430), Expect = 1.380e-44
Identity = 99/248 (39.92%), Postives = 147/248 (59.27%), Query Frame = 0
Query:   60 EEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSK---------LYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQK-VLRRWRTLCRGVLLGAQLLEEYG 297
            E+K+LE     E +P+++   + HH+Y+L + L +FE L P  KA GL KG  V+L+  V  L  A +W++   +V++SE  KP K  +K  + D    S+         L+G WQT  + P    NG +PKN+YGN+E +  SPA +P G VH+R  +I  +A  LG+DFAPA+ GFE + GR +P + GI+V +   +ML DAH   +Q  +EK A A  QK VL+RW  L + +LL  +L ++YG
Sbjct:  408 EKKKLETLKLAEGMPTSLEGFRKHHLYILERYLGQFECLHP-RKAIGLFKGQPVFLREHVQPLESAFKWRRLGREVKESERQKPAKWQSKGNDNDDSDASEEGKPSGSLALFGLWQTTEFEPLPMINGHIPKNKYGNIEIW--SPAHIPRGAVHLRLPRIDSIAESLGIDFAPAVVGFEVRNGRPMPKMSGIVVAQSHEEMLLDAHAERQQQTIEK-AIAHNQKLVLKRWENLTKRLLLRQRLEDDYG 651          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A8K1CMS4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMS4_PYTOL)

HSP 1 Score: 169 bits (427), Expect = 4.530e-44
Identity = 99/252 (39.29%), Postives = 146/252 (57.94%), Query Frame = 0
Query:   60 EEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKK----GEKDGEGTSK---------LYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGD 298
            E  EL +   +E +P+++   K HHVY L ++L ++E + P  KA G+ KG  VY +  V  +R   +W++   +++  E  KP K   K     G+ D +G S          LYG WQT+     A  NG VPKN+YGN+E +  SPA LP G+VH+R  +I RVA++LGVDFAPA+ GFE K G+  P ++GI+V      ML DAH   +QS +E+  +   Q +L+RW  L + +LL  +L +EYG+
Sbjct:  426 ERDELTSLKQSEEMPNSLEGFKKHHVYCLERHLGRYECIYP-RKAVGIFKGQAVYPRKSVQTVRTMFQWRQLGREIKAEEQQKPAKREGKPSKGGGDSDDDGISPGGSGAVGRALYGFWQTDEVTVAAVENGVVPKNKYGNIEVW--SPAHLPRGSVHLRLSRIERVASQLGVDFAPAVVGFEVKNGKNYPKIEGIVVAATVEAMLVDAHAHIQQSTIEQAIEKNQQAILKRWERLVKRLLLKQRLNDEYGE 674          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A1B6KHJ6_9HEMI (Uncharacterized protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KHJ6_9HEMI)

HSP 1 Score: 160 bits (405), Expect = 1.160e-43
Identity = 97/246 (39.43%), Postives = 147/246 (59.76%), Query Frame = 0
Query:   60 EEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP-GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSK-----LYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLE--KRAKARGQ-KVLRRWRTLCRGVLLGAQLLEEY 296
            E+++L+ +++++P+P+++   KNH +Y L +NLLKFEA+ P  A   G V+G  VY +  V +L     W K A  VR++E    +  A  K +K  +         L+G WQ E ++P  A +GKVP+NEYGNVE +   P  LP GTVH++  Q++RVA KL +D APA+ G+E   G   PVLDG IVC+E   +L DA   W++ + E  KRAK + + +V   W+ L +G+L+  +L   Y
Sbjct:   44 EDEDLDRQLHDKPLPTSVTEYKNHPLYALRRNLLKFEAIYPPDAPPLGFVRGEPVYSRGCVVELHTRETWIKQAKLVRRNEEPYKIVKARPKWDKVSQTVINDLPLPLFGHWQVEDYIPPIAVDGKVPRNEYGNVELY--KPCMLPGGTVHLQVPQLARVARKLSIDCAPAVVGWEFSGGGSHPVLDGFIVCEEFKDILLDA---WDKEMDESAKRAKEKMEARVYGNWKKLIKGLLIRERLKARY 284          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: UPI0018D989F2 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D989F2)

HSP 1 Score: 168 bits (426), Expect = 1.210e-43
Identity = 101/243 (41.56%), Postives = 144/243 (59.26%), Query Frame = 0
Query:   60 EEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP-GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKI--ATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLR---RWRTLCRGVLLGAQLLEEY 296
            E++ L+ ++  +P+P++I+  KNHH+YVL ++LLKFEAL P  A   G  +G  VY +  V  L     WKK  L ++  E  KP K+  A  +  K  E    LYG WQTE ++P AA +GKVP+NEYGNVE F   P+ LP GTVH++   + RVA K+GVD APA+ G++   G   PV DG +VCKE   +L D    WE+   E+  K   +K +R    W+TL  G+L+  +L + +
Sbjct:  495 EDEHLQKQLQEKPMPTSISEFKNHHLYVLKRHLLKFEALYPESATILGYCRGEAVYSRNCVHTLHTKETWKKQGLAIQHGE--KPYKMVKARPRKNKSHEPLLPLYGQWQTELYIPPAAVDGKVPRNEYGNVELFQ--PSMLPMGTVHLQIPGLHRVAQKIGVDCAPAMVGWDYHGGFCHPVFDGFVVCKEFTDILLDN---WEKDNAEREHKLNQKKRIRAEKNWKTLVTGLLIRERLNDRF 730          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: UPI001EE9F1B6 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9F1B6)

HSP 1 Score: 162 bits (409), Expect = 3.250e-43
Identity = 97/246 (39.43%), Postives = 151/246 (61.38%), Query Frame = 0
Query:   60 EEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP-GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSK-----LYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLE--KRAKARGQ-KVLRRWRTLCRGVLLGAQLLEEY 296
            E+++L+ +++++P+P+T++  KNH +Y L ++LLKFEA+ P  A   G V+G  VY ++ V  L     W K+A  VR++E    +  A  K +K  +         L+G WQ E ++P  A +GKVP+NEYGNVE +   P  LP GTVH++  Q++RVA KLG+D APA+ G+E   G   PVLDG IVC+E  + L +A   W++ + E  KR+K + + KV   W+ L +G+L+  +L  +Y
Sbjct:  149 EDEDLDRQLHDKPLPTTVSEYKNHPLYALRRHLLKFEAIYPPDALPMGFVRGEPVYSRSCVVDLHTRETWIKEAKLVRRNEEPYKIVKARPKWDKVSQTVINDLPLPLFGHWQVEDYIPPPAVDGKVPRNEYGNVELY--KPCMLPAGTVHLQVPQLARVARKLGIDCAPAVVGWEFSGGGSHPVLDGFIVCEEFKETLLNA---WDKEMDESAKRSKEKLEAKVYGNWKRLIKGLLIRERLKTKY 389          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: UPI00077A79C6 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A79C6)

HSP 1 Score: 163 bits (412), Expect = 5.050e-43
Identity = 98/242 (40.50%), Postives = 145/242 (59.92%), Query Frame = 0
Query:   60 EEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAA-GLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELG-KPVKIATKKGEKDGEGTS---KLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEY 296
            E+ +LE K+  +P+P++I   KNH +YVL ++LLKFEA+ P   A  G  +G  +Y +  V  L    +W  +AL V++ E   K VK   K+ +   E  S    L+G WQTE + P  A +GKVP+NEYGNVE F   P  LPPGT H++ + I RVA KLG+D A A+ GF+   G   PV+DG++VC+E  Q+L DA    E+    ++A+ R +++L  W+ L R +L+  +L + Y
Sbjct:  169 EDSQLEDKLLEKPLPTSITEFKNHPLYVLKRHLLKFEAIYPETAAILGYCRGEAIYSRDCVHLLHTREKWLNEALVVKQGEKAYKVVKGRPKRNQPIHERDSVTIDLFGRWQTERYKPPPAKDGKVPRNEYGNVELF--LPCMLPPGTKHIQINGIQRVAKKLGIDCAQAVVGFDFHCGFSHPVIDGVVVCQEFEQVLLDAWREEEELAERRKAEKREKRMLANWKLLTRSLLIRERLKKRY 408          
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A7R9I670_9NEOP (Hypothetical protein n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9I670_9NEOP)

HSP 1 Score: 159 bits (402), Expect = 6.010e-43
Identity = 103/294 (35.03%), Postives = 149/294 (50.68%), Query Frame = 0
Query:    7 WWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP-GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLE---KRAKARGQKVLRRWRTLCRGVLLGAQLLEEY 296
            WW  +LR WR +  P                                      EE++LE ++++ P+PS     KNH +YVL K+LLKFEA+ P  A   G ++G +V+ +  V  L     W K+A  VR  E  KP KI   + + D     +++G+WQ E ++P  A +GKVP+N YGNVE F   P  LP GTVH++ + ++RVA KL +D APA+ GF+   G   P  DG +VC+E   +L DA   W Q L E   +R     ++V   WR L +G+L+  +L   Y
Sbjct:   43 WWEHSLRPWRGSWTPM----------------------------------DKEEEEDLEQQLHDRPLPS----YKNHPLYVLRKDLLKFEAIYPPDAPTLGFIRGQEVFARECVKNLHSRETWVKEAKVVRLGE--KPYKIVKARPKYD-----RVFGEWQVEDYIPPPAVDGKVPRNAYGNVELF--KPCMLPKGTVHLQINGLNRVAKKLNIDCAPAVVGFDFHCGGSHPTYDGFVVCEEFVDILLDA---WNQELEESEKRRQDKHDKRVYGNWRRLIKGLLIRERLQARY 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZU7_9PHAE6.350e-15178.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJY2_ECTSI1.050e-14074.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y1I3Q9_KLENI6.690e-4538.70Transglutaminase-like n=1 Tax=Klebsormidium nitens... [more]
W2QJ20_PHYPN1.380e-4439.92Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A8K1CMS4_PYTOL4.530e-4439.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1B6KHJ6_9HEMI1.160e-4339.43Uncharacterized protein n=1 Tax=Graphocephala atro... [more]
UPI0018D989F21.210e-4341.56DNA repair protein complementing XP-C cells homolo... [more]
UPI001EE9F1B63.250e-4339.43DNA repair protein complementing XP-C cells homolo... [more]
UPI00077A79C65.050e-4340.50DNA repair protein complementing XP-C cells homolo... [more]
A0A7R9I670_9NEOP6.010e-4335.03Hypothetical protein n=1 Tax=Timema bartmani TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018326Rad4 beta-hairpin domain 1SMARTSM01030BHD_1_2coord: 69..120
e-value: 2.2E-14
score: 63.8
IPR018326Rad4 beta-hairpin domain 1PFAMPF10403BHD_1coord: 70..119
e-value: 6.9E-14
score: 51.4
IPR018328Rad4 beta-hairpin domain 3SMARTSM01032BHD_3_2coord: 180..256
e-value: 9.9E-31
score: 118.1
IPR018328Rad4 beta-hairpin domain 3PFAMPF10405BHD_3coord: 180..254
e-value: 5.0E-24
score: 84.5
IPR018327Rad4 beta-hairpin domain 2SMARTSM01031BHD_2_2coord: 122..173
e-value: 0.0036
score: 26.5
NoneNo IPR availableGENE3D2.20.20.110coord: 72..122
e-value: 5.9E-6
score: 27.8
IPR042488Rad4, beta-hairpin domain 3 superfamilyGENE3D3.30.70.2460coord: 186..261
e-value: 2.4E-17
score: 64.4
IPR004583DNA repair protein Rad4PANTHERPTHR12135DNA REPAIR PROTEIN XP-C / RAD4coord: 7..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1229contigH-canaliculatus_F_contig1229:2334..6658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1229.1960.1mRNA_H-canaliculatus_F_contig1229.1960.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1229 1142..7572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1229.1960.1 ID=prot_H-canaliculatus_F_contig1229.1960.1|Name=mRNA_H-canaliculatus_F_contig1229.1960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=301bp
MASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADA
ADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP
GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKK
GEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPP
GTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQ
MLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGDHD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004583DNA_repair_Rad4
IPR042488Rad4_BHD3_sf
IPR018327BHD_2
IPR018328Rad4_beta-hairpin_dom3
IPR018326Rad4_beta-hairpin_dom1