prot_H-canaliculatus_F_contig12244.1927.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12244.1927.1
Unique Nameprot_H-canaliculatus_F_contig12244.1927.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length860
Homology
BLAST of mRNA_H-canaliculatus_F_contig12244.1927.1 vs. uniprot
Match: A0A6H5JC90_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC90_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.110e-22
Identity = 245/790 (31.01%), Postives = 304/790 (38.48%), Query Frame = 0
Query:  102 APTEGGGPPAATVRGIDGGDRAVRLVMAGEILALVMLMFLQANSXXXXXXXXXXXXXXXXXXXXXXSGSGNLVAELAGAVALWAARAAGALAGALASVVVPPLLAALATARVAESFVSPVNASGRGDCGGSKASHARSEPRKPSPKPSPPAMAAVVGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMPAIDLVEAALRLVVVGGGATSLFGGCLALLRPVAECCLRRLCMLAAAILRFPLSR-----LRKRETSVSTDGXXXXXXXXXXXXXXXGIDRTSNGRFVAPTVLSSPATKEPQKKRKGIRGFRAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARIAILEQSAVQAAKGETPQAAPARGAATVEEQYDEFLGAAIGALASNLKCAVSRRARGWRVSVANKLAPAANRXXXXXXXXXMPPGAPPAALGDQQGLALGNG---------------------RGGDEPPASATSAASTVLASTAASPQPPRPSLGAALPAPPDPVLDGNAREELGGATEWEWEWKPIRGGSYREDGEEGQRRPHQQQPQQALETLTADDFDWLGAVDCAVATVFASRRQAGRFPHVDGDGGVCWRPRGGAGSGYQWSV---------DADHGAVGSGARSGRFPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGVTLRSEYRLARGRRWEALALLVMAKAFAAVSIIAVFSLLLWEGGGPAWMLCAVEACRCVALLSLIFAAVQAGIKP 856
            APTE  G  A+T +     D  VR+VMA E+ A+V+L FL                           G   LVA L  A A W A AA A A  + +V +PPL AALATA+VA++F    N SG     G    H+ S+P          A AA VGD                                   SP               XXXXXXXXXXX          I L E  LRLV+VGGG+ SL GGC A  RPV    LRRL +L  A L +P SR     ++ + +      XXXXXXXXXXXXXXX    + NGR       S P +       K +     AG                            A +  IL  +        TP + P   A  +E   +E + A +          V  +A  WR  V +K      R         MP G+   A G+ + ++LG G                                  A  V+A  A    PP     A LP+           EE+G      WEW+P  G           R P +      L    +  + WL  VDCAVATV++ R  A         GGVC R     G+G +            DA HGA G  A                                      GV   +R E+ LA+ RRW ALALLV+ KA  A SIIA  SL L  GGGPAW++CAVEA R VA+L+LIFAAVQ+GI P
Sbjct:  563 APTEDTGLLASTKKDEAADDWTVRVVMASEVTAVVVLAFLLVERTVNHDDMNAFLYAEAFEAGQTGVG---LVAGLVAAGARWTAVAAAAGAATVVAVALPPLFAALATAQVAKTFAPKRNGSG-----GIGNGHSSSDPAASFAMDPAGAPAASVGDDAALRRSSSSSSANTDAHTVGGDPSSRPDR-----SPETGTQGAMGGPLLGGXXXXXXXXXXX---------VIQLPEVLLRLVIVGGGSLSLMGGCWAGSRPVLGFVLRRLALLVEAFLLYPFSRPGRGTVKSKSSXXXXXXXXXXXXXXXXXXXXXXXXXSVNGRS---GDRSKPKSSRSVATEKRVSLTATAGVQPASKPQAASVPAPIAVPRPNDNV---AVQKPILSLA--------TPASEPMERAVLIEPTAEERVAATLREKYGAASTVVRTKAAKWRSVVLDKT----KRARVYLAKKIMPSGS---AAGEDEDVSLGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKVVAWIA----PPPVDRQACLPS-----------EEVG------WEWQPFLG-----------RTPGEHDDGGGL----SGGWGWLAVVDCAVATVYSGRTAA--------IGGVCGRGSPNDGTGRREGSRKCPASGDDDAVHGAGGGTA-----------------------FVSSSDVVLLWAVVLGVFAAVRREFWLAKCRRWNALALLVIGKAVVAGSIIAASSLRL-GGGGPAWLVCAVEASRSVAVLALIFAAVQSGIGP 1241          
BLAST of mRNA_H-canaliculatus_F_contig12244.1927.1 vs. uniprot
Match: D7G4J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J6_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 3.840e-12
Identity = 91/229 (39.74%), Postives = 113/229 (49.34%), Query Frame = 0
Query:    1 PFPVTPTLKLFLGALAVLQAWASLHAAGLSPGAFAAATGAVWVLV--AGAV--IFFSWSXXXXXXXXXXXAVPGARERGVAVGTRGASLAGGDANAPLPVGAAGPAPTEGGGPPAATVRGIDGGDRAVRLVMAGEILALVMLMFLQANSXXXXXXXXXXXXXXXXXXXXXXSGSGNLVAELAGAVALWAARAAGALAGALASVVVPPLLAALATARVAESFVSPVNASG 225
            P PVTP L++FLGA+AVLQ    LHAAGL+  A A + GAVWV V  AG V  +    S           AV  A     AV      +AG D +A     A   APTE  G  A+T +G   G   VR+VMA E+ A+V+L+FL                          +G G LVA L  A A W A AA A A  + +V +PPL AALATA+V ++F    N SG
Sbjct:  154 PLPVTPQLRVFLGAVAVLQTGTVLHAAGLTGRALAVSAGAVWVSVGVAGCVCGVVEGGSREDSGGGRSRSAVAVA----AAVVADLVRVAGADGSA---ASADALAPTEDTGLLASTKKGEAAGGWTVRVVMASEVTAVVVLVFLLVERTVNHYDDNSAFLYAEAFEAEQ-TGVG-LVAGLVAAGARWTAVAAAAGAATVVTVALPPLFAALATAQVVKTFAPARNGSG 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12244.1927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC90_9PHAE1.110e-2231.01PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G4J6_ECTSI3.840e-1239.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 828..850
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 796..822
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 823..827
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..763
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 785..795
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 851..860
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 764..784
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.565
NoneNo IPR availableTMHMMTMhelixcoord: 799..821
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 764..786

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12244contigH-canaliculatus_F_contig12244:145..3307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12244.1927.1mRNA_H-canaliculatus_F_contig12244.1927.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12244 145..3307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12244.1927.1 ID=prot_H-canaliculatus_F_contig12244.1927.1|Name=mRNA_H-canaliculatus_F_contig12244.1927.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=860bp
PFPVTPTLKLFLGALAVLQAWASLHAAGLSPGAFAAATGAVWVLVAGAVI
FFSWSSAAAAAAAAAAAVPGARERGVAVGTRGASLAGGDANAPLPVGAAG
PAPTEGGGPPAATVRGIDGGDRAVRLVMAGEILALVMLMFLQANSCSSSN
SSSSSRGGGGGGGGSGESGSGNLVAELAGAVALWAARAAGALAGALASVV
VPPLLAALATARVAESFVSPVNASGRGDCGGSKASHARSEPRKPSPKPSP
PAMAAVVGDAAAAEAAAAAMGKPASTLRRSSSSSSITSEARKRLSPSPSA
EGRRSGAIAVSSSSSSSSSSDVDGGSGGGMPAIDLVEAALRLVVVGGGAT
SLFGGCLALLRPVAECCLRRLCMLAAAILRFPLSRLRKRETSVSTDGSTD
GSTGGGTGGGGGGIDRTSNGRFVAPTVLSSPATKEPQKKRKGIRGFRAAG
GGGSDGGGVTGSDSEHSSTASAAATTMAAARIAILEQSAVQAAKGETPQA
APARGAATVEEQYDEFLGAAIGALASNLKCAVSRRARGWRVSVANKLAPA
ANRWRVSLAKKIMPPGAPPAALGDQQGLALGNGRGGDEPPASATSAASTV
LASTAASPQPPRPSLGAALPAPPDPVLDGNAREELGGATEWEWEWKPIRG
GSYREDGEEGQRRPHQQQPQQALETLTADDFDWLGAVDCAVATVFASRRQ
AGRFPHVDGDGGVCWRPRGGAGSGYQWSVDADHGAVGSGARSGRFPGGGG
GGGGGGGGSGGQGFVSTAQVVLLLVVVVGVGVTLRSEYRLARGRRWEALA
LLVMAKAFAAVSIIAVFSLLLWEGGGPAWMLCAVEACRCVALLSLIFAAV
QAGIKPDPKA
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