prot_H-canaliculatus_F_contig1224.1926.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1224.1926.1
Unique Nameprot_H-canaliculatus_F_contig1224.1926.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length617
Homology
BLAST of mRNA_H-canaliculatus_F_contig1224.1926.1 vs. uniprot
Match: A0A6H5KVW8_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW8_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.440e-77
Identity = 285/641 (44.46%), Postives = 339/641 (52.89%), Query Frame = 0
Query:   17 GVNGEGRTCVACRRSKVKCSRGLPCDRCSRLKLVCIAQVRGRGRPVASSKGAKRGLKMEYD------KNTGSGNSSGYSAGAGKAPGDVAAQRRECTDRSNPKGPDGDMSPF---SAGVLSSAYPSLGRPRGGGFAPAACSDGTENANGGNSGASHRRGDKRSCGGMPAGFSSDVSAPPLAASMTTTTTGMGCPAAL---GYFGPLSSVADNGSGGGVR-REGLPLSSHEQQHFGPSSRPFPPHSISSGLSQ-QXXXXXXXXXXXHEPQAYAVFPGPRAFSQPL-----VHDGGGGXXXXXXSNGLGDGRGLI------SPVARISSGGSWRAVYNDGSNINNGDAGVATAAAVGVGGTGDGARNNMNAAKGQWDFIEAPLIPAARAS-----DGTDGFASGHEGFLSAQMGHGTNGGLGCVDGGXXXXXXXXXXXXXXXXXXXRLGXXIGSGRGKTDSAFSSNGSFSGKGFM--TTWVDTMDEHRDAVATAXXXXXXXXXXXXXXAESGG--------PDDAQCLSRSTDKQARWLMDVARDANDPGPDSVERPPGANGGGVDPTDTIVTGFWKLFSEQEVHRPKAVLVIRHWALCALDRRSTQLMRKTVNMARALSINVAEILNDYSIYAMFHQLLQEA 617
            G  GEGRTCV+CR+SKVK              LVCIAQVRGRGRPVAS    K+ LK+  D      KN G  + +  SA   K+   +AA+    +  +N  G     S     S+GVLS A+PSL    GGG        G + A  G+SG+   R             SS V  PPLAA  +  + G   P+ L      G  S   D+G  GGV   EG  L+ HEQ+HF   SR  PP  + SG          XXXXXX     Y       A  +PL            XXXXXX   L DG  +       SP +  S+GGSWR  +  G        G A  A  G+GG G+ +RN+++   GQW+++    +    A      +     +S  E F    MGH  N       G XXXXXXXXXXXXXXX XXX   XX    RGK  S+ SS+G F+G G    +TWV+ MDEH  AV   XXXXXXXXX      E G         PD    LS+S DKQ RWL+ V R A   G DS  R PGANGG VDPT+ IV+GFWKLF E  +HRPKAVLVIRHWALCALDRRST LMR+TV+MARALSINVAEILNDYSIYAMFH+LL+EA
Sbjct:   80 GACGEGRTCVSCRKSKVKXXXXXXXXXXXXXXLVCIAQVRGRGRPVASVTAGKKSLKLVEDGVGRSSKNGGGADDTSRSARVAKS---MAAEAEPGSSHANGSGSSSRESSGASPSSGVLSCAHPSLA---GGG-------GGIDGATAGSSGSMSTR---------KVRLSSSVEVPPLAAVASQISAGTS-PSPLYAAAVDGEGSPRGDHGGDGGVGVGEGFLLAHHEQRHFEACSRALPPRIMQSGTPTIAPPQQHXXXXXXXXXGVYGALHNSSA--RPLSAHXXXXXXXXXXXXXXXXXXLSDGGSMTAMNASASPGSISSAGGSWRGEFIGGP-------GAAAHAVGGLGGMGEISRNDIDVPNGQWEYMNGTEVATTTAKLEGEVNAPTSSSSPAESFAPMPMGHMAN------SGXXXXXXXXXXXXXXXXEXXXXXXXXXXXXRGKGISSLSSDGGFNGAGKAPASTWVEAMDEHTHAVXXXXXXXXXXXXPTA--GERGAXXXXXXXXPDGRIFLSKSEDKQQRWLIAVERGAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFREHGIHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREA 680          
BLAST of mRNA_H-canaliculatus_F_contig1224.1926.1 vs. uniprot
Match: D7FVP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP7_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 9.730e-53
Identity = 241/632 (38.13%), Postives = 287/632 (45.41%), Query Frame = 0
Query:   17 GVNGEGRTCVACRRSKVKCSRGLPCDRCSRLKLVCIAQVRGRGRPVASSKGAKRGLKMEYD------KNTGSGNSSGYSA------GAGKAPGDVAAQRRECTDRSNPKGPDGDMSPFSAGVLSSAYPSLGRPRGGGFAPAACSDGTENANGGNSGASHRRGDKRSCGGMPAGFSSDVSAPPLAASMTTTTTGMGCPAALGYFGPLSSVAD-----NGSGGGVRREGLPLSSHEQQHFGPSSRPFPPHSISSGLSQQXXXXXXXXXXXHEPQAYAVFPGPRAFS-QPLVHDGGGGXXXXXXSNGLGDGRGLISPVARI------SSGGSWRAVYNDGSNINNGDAGVATAAAVGVGGTGDGARNNMNAAKGQWDFIEAPLIPAARASDGTDGFASGHEGFLSAQMGHGTNGGLGCVDGGXXXXXXXXXXXXXXXXXXXRLGXXIGSG-----RGKTDSAFSSNGSFSGKGFM--TTWVDTMDEHRDAVATAXXXXXXXXXXXXXXAESGGPDDAQCLSRSTDKQARWLMDVARDANDPGPDSVERPPGANGGGVDPTDTIVTGFWKLFSEQEVHRPKAVLVIRHWALCALDRRSTQLMRKTVNMARALSINVAEILNDYSIYAMFHQLLQEA 617
            G  GEGRTCV+CR+SK                LVCIAQVRGRGRPVAS    K+ LK++ D      KN G  + +  SA      GA + PG                            VLSSA+PSL    GGG       DG+   + G+ G            G P   SS V  PPLAA  +    G   P+ L Y   L           G GGG   EG  L+  EQ+H    SR   P  + SG+         XXXXX            R  S  PL   GGG XXXXXX     DG  + +  A        S+GGSWR  +  G        G A  A  G+GGTG+ +RN+++   GQW+++  P +                                      XXXXXXXXXXXXXXXXXXX   XX         RGK  S+ SS+G F+G G +  +TWV+ MDEH  AVA                  +G          +             D                 G VDPT+ IV+GFWKLF E EVHRPKAVLVIRHWALCALDRRST LMR+TV+MARALSINVAEILNDYSIYAMFH+LL+EA
Sbjct:   78 GACGEGRTCVSCRKSK----------------LVCIAQVRGRGRPVASMTAGKKSLKLDEDRVGRSSKNGGGADDTSRSARVAKSVGAEEEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSAHPSLAGGGGGGI------DGSTTGSSGSMGTRT---------GQP---SSSVEVPPLAAVASQIAAGTS-PSPL-YAAALDGEGSPRGDHGGDGGGGVGEGFLLAPLEQRHLEACSRALSPRIMQSGIPTIAPPQQHXXXXXQGVYGALHNSSARPLSTHPLQFHGGGXXXXXXXXXXXSDGGSMAAMNASAAQGSISSAGGSWRGAFLGGP-------GPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMNTPSVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRRGKCISSLSSDGGFNGAGKVAASTWVEAMDEHTHAVA------------------AGXXXXXXXXXPTAGXXXXXXXXXXPD-----------------GSVDPTEAIVSGFWKLFREHEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREA 631          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1224.1926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVW8_9PHAE1.440e-7744.46Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FVP7_ECTSI9.730e-5338.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 19..62
e-value: 1.6E-4
score: 31.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 25..52
e-value: 2.3E-5
score: 24.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 24..51
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 24..53
score: 9.578
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 21..77
e-value: 3.5E-6
score: 28.9
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 23..59
NoneNo IPR availablePANTHERPTHR31845FAMILY NOT NAMEDcoord: 13..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1224contigH-canaliculatus_F_contig1224:20775..28273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1224.1926.1mRNA_H-canaliculatus_F_contig1224.1926.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1224 20769..28273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1224.1926.1 ID=prot_H-canaliculatus_F_contig1224.1926.1|Name=mRNA_H-canaliculatus_F_contig1224.1926.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=617bp
MAESSDGENQSGKGGGGVNGEGRTCVACRRSKVKCSRGLPCDRCSRLKLV
CIAQVRGRGRPVASSKGAKRGLKMEYDKNTGSGNSSGYSAGAGKAPGDVA
AQRRECTDRSNPKGPDGDMSPFSAGVLSSAYPSLGRPRGGGFAPAACSDG
TENANGGNSGASHRRGDKRSCGGMPAGFSSDVSAPPLAASMTTTTTGMGC
PAALGYFGPLSSVADNGSGGGVRREGLPLSSHEQQHFGPSSRPFPPHSIS
SGLSQQQQQQQQQQQEQHEPQAYAVFPGPRAFSQPLVHDGGGGSSGGSSS
NGLGDGRGLISPVARISSGGSWRAVYNDGSNINNGDAGVATAAAVGVGGT
GDGARNNMNAAKGQWDFIEAPLIPAARASDGTDGFASGHEGFLSAQMGHG
TNGGLGCVDGGGGAPRGGGGGGGGGGGGGGRLGGGIGSGRGKTDSAFSSN
GSFSGKGFMTTWVDTMDEHRDAVATAAAAAAAGAIASEAAAESGGPDDAQ
CLSRSTDKQARWLMDVARDANDPGPDSVERPPGANGGGVDPTDTIVTGFW
KLFSEQEVHRPKAVLVIRHWALCALDRRSTQLMRKTVNMARALSINVAEI
LNDYSIYAMFHQLLQEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd