prot_H-canaliculatus_F_contig12217.1903.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12217.1903.1
Unique Name	prot_H-canaliculatus_F_contig12217.1903.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	216

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12217.1903.1 vs. uniprot
Match: A0A6H5J9F1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9F1_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 9.720e-30
Identity = 95/170 (55.88%), Postives = 109/170 (64.12%), Query Frame = 0

Query:    6 SRRLANRRGAARVLAAAEGRRREXXXXXXXXXXXXA-EARGMLVGHGEADRAALEGAQEAARRYAEALDRGQARVEQAEAERLRAREATAGLLARADELTRKAEEEAAQGARGASSAESERAALXXXXXXXXXXXXXXEVILREREREAAALRRALAAEDSKRQEKRLLR 174
            +RR A +  AARVL +AE R+R             A EARG L+G  EAD+AALEGA EAARRY EA++RGQARVE AEA+R R + + A LL R DELTRK        AR ASSAESERAAL               VIL EREREAA LRRALAA+D+K +E RLLR
Sbjct:    9 TRRPARQTAAARVLVSAEARQRAAAAKAAERRERAAAEARGKLLGQEEADQAALEGALEAARRYREAVERGQARVEDAEADRRRMQASAAKLLERVDELTRKXXXXXXXXAREASSAESERAALSLAASMAEARAREMMVILDEREREAAKLRRALAAKDAKLKE-RLLR 177

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BLAST of mRNA_H-canaliculatus_F_contig12217.1903.1 vs. uniprot
Match: D7FLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL9_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 4.800e-9
Identity = 70/170 (41.18%), Postives = 79/170 (46.47%), Query Frame = 0

Query:    6 SRRLANRRGAARVLAAAEGRRREXXXXXXXXXXXXA-EARGMLVGHGEADRAALEGAQEAARRYAEALDRGQARVEQAEAERLRAREATAGLLARADELTRKAEEEAAQGARGASSAESERAALXXXXXXXXXXXXXXEVILREREREAAALRRALAAEDSKRQEKRLLR 174
            +RR A +  AARVL +AE R+R             A EARG L G  EAD AALEGA EAARRY EA++RGQARVE                                              AL               VIL EREREAA LRRALAA+D+K +EKRLLR
Sbjct:  927 TRRPARQTAAARVLVSAEARQRAAAAKAAERREWAAAEARGKLRGQEEADEAALEGALEAARRYGEAVERGQARVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSLAASTAEARAREMMVILDEREREAAKLRRALAAKDAKLKEKRLLR 1096

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12217.1903.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12217.1903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J9F1_9PHAE	9.720e-30	55.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FLL9_ECTSI	4.800e-9	41.18	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 118..166
None	No IPR available	COILS	Coil	Coil	coord: 58..92
None	No IPR available	COILS	Coil	Coil	coord: 19..39

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12217	contig	H-canaliculatus_F_contig12217:1031..3315 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12217.1903.1	mRNA_H-canaliculatus_F_contig12217.1903.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12217 1031..3315 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12217.1903.1 ID=prot_H-canaliculatus_F_contig12217.1903.1|Name=mRNA_H-canaliculatus_F_contig12217.1903.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=216bp
DRRLRSRRLANRRGAARVLAAAEGRRREAEKAAAAREKAAAEARGMLVGH
GEADRAALEGAQEAARRYAEALDRGQARVEQAEAERLRAREATAGLLARA
DELTRKAEEEAAQGARGASSAESERAALALEVSTAEARAREMEVILRERE
REAAALRRALAAEDSKRQEKRLLRPHGGPPAGAGAGAKPASVPPHPPGAM
LPRSGAGVGDEGGDGG