prot_H-canaliculatus_F_contig12214.1902.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12214.1902.1
Unique Nameprot_H-canaliculatus_F_contig12214.1902.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length387
Homology
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: A0A6H5JJ70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ70_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 3.600e-63
Identity = 204/439 (46.47%), Postives = 248/439 (56.49%), Query Frame = 0
Query:    3 GLEGVLADDGVTCCLAACGQCGGSGCSDIEGTEG-DDCCIGDITQAGLTCGVDGVVAPCLLDESITATMSPSIAPAAASTAQPSAPTPAGTVQPPTGQXXXXXXXXXXXXXXXXAQVAVAVTTAPLQ---------TAATLDPT--------PAATTIVPATXXXXXXXXXXXXXXXXXXXXXXXXTE------ASSTCDNGYPGWQTQEACCTEFCGQCGGSGCGALGSADCCVDNVMAAQLVCGIDTLEAPCIV-----PVLGDGETYAPYAAPTPPXXXXXX------------------------AATAAPIGADATSQPSGSRGVDGATEEPTP-SATGNDTDATGTPAAPTSAPVRTXXXXXXXXXTTPECTEGVEGFAHDVVCCPTACGQCGGSGCENIVGTAGASDCCSDAILISGEMCSDNGGVAPCILG 387
            G+EG+L+ +   CC+AACG CGGSGCSD+EGT+G  DCC+ DI  + +TCGVD  VAPC++D  I  T      P+A   A P+              XXXXXXXXXXXXXXXX       TTAP Q           ++  PT        PAA  +V A  XXXXXXXXXXXXXXXXXXX    T       ASS C+NGYPGWQ+ EACC+EFCGQCGGSGCG LGSA CC DN+++A LVCG+D LEAPCI+       L +G T AP  A    XXXXXX                         AT +P+       P+ S G   A +E  P S T     A GT  AP++                PEC +G+EGF H V CC  +CGQCGG+GCEN+ G  GAS+CCS  +L +  +CS++G VAPC+LG
Sbjct:   10 GVEGILSSNEEVCCIAACGMCGGSGCSDVEGTDGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITT------PSATEAATPA-----------PAXXXXXXXXXXXXXXXXXXXXXXXTTTAPGQXXXXXXXXIAPSSTSPTESLTATAQPAAAPVVVAAPXXXXXXXXXXXXXXXXXXXAGSFTPVAPVAGASSYCENGYPGWQSNEACCSEFCGQCGGSGCGELGSATCCYDNIISAGLVCGVDVLEAPCIIINYTPAPLAEGVT-APATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGSEAPQESVPPSVTPPVGGAVGTTPAPSA----------------PECDDGIEGFRHGVACCSVSCGQCGGAGCENLEG--GASECCSHDVLATNNLCSESG-VAPCVLG 411          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D7G8G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G7_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.310e-45
Identity = 189/449 (42.09%), Postives = 222/449 (49.44%), Query Frame = 0
Query:   22 QCGGSGCSDIEGTEGDDCCIGDITQAGLTCGVDGVVAPCLLDESITATMSPSIAPAAASTAQPSAPTPAGTVQPPTGQXXXXXXXXXXXXXXXXAQVAVAVTTAPLQTAAT------------LDPTPAATTIVPATXXXXXXXXXXXXXXXXXXXXXXXXTE---------------------------------ASSTCDNGYPGWQTQEACCTEFCGQCGGSGCGALGSADCCVDNVMAAQLVCGIDTLEAPCIV-----PVLGDGETYAPYAAPTPPXXXXXXA---------------------------------ATAAPIGADATSQPSGSRGVDGATEEPTPSATGNDTDATGTPAAPTSAPVRTXXXXXXXXXTTPECTEGVEGFAHDVVCCPTACGQCGGSGCENIVGTAGASDCCSDAILISGEMCSDNGGVAPCILG 387
             CGGSGCSD++GT G +CC+  I  + +TCGVD  VAPC++D  I  T      P+AA  A P+              XXXXXXXXXXXXXXXX       TTAP  TA                PTP A       XXXXXXXXXXXXXXXXXXXXXXXX                                   A+S C+NGY GWQ  EACC+EFCGQCGGSGCG LGSA CC DN++ A  VCG+D LEAPCI+       L +GET AP  APT  XXXXXX                                  AT +P+       P+ S G    +E P  S         G     T AP            +TPEC +G+EGF H V CC  +CGQCGG+GCE + G  GA +CCS  +L +   CS+ G  APC+LG
Sbjct:    1 MCGGSGCSDVDGTRGSECCVDHILDSDVTCGVDDGVAPCIVDPDIITT------PSAAEAATPA-------------XXXXXXXXXXXXXXXXXXXTPSMTTTAPGPTATPSMTXXXXXXXXXXXPTPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTPVAPVAGATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCCFDNIINAGKVCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAETEXXXXXXXXATESPVSRGGVGTPTSSPG---GSEAPQESVAXXXXXPVGGGVGTTPAP------------STPECADGIEGFRHGVACCSVSCGQCGGTGCEYLEG--GALECCSHDVLTTNSSCSETG-EAPCVLG 412          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 7.760e-7
Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0
Query:  321 TTPECTEGVEGF--AHDVVCCPTACGQCGGSGCENIVGTAGASD--CCSDAILISGEMCSDNGGVAPCIL 386
            TT  C+ G+EG   A+  VCCPTACG CGG  C      AG  D  CC   I++SG  CS+N  +APCI+
Sbjct:   48 TTQTCSNGIEGIESANGDVCCPTACGFCGGEACTEAAVNAGLDDGDCCFGDIIVSGASCSENQ-MAPCII 116          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.030e-6
Identity = 105/254 (41.34%), Postives = 126/254 (49.61%), Query Frame = 0
Query:    2 DGLEGVLADDGVTCCLAACGQCGGSGCSDIEGTEG-DDCCIGDITQAGLTCGVDGVVAPCLLDESITATMSPSIAPAAASTAQPSAPTPAGTVQPPTGQXXXXXXXXXXXXXXXXAQVAVAVTTAPLQTAATLDPTPAATTIVPATXXXXXXXXXXXXXXXXXXXXXXXXTEASSTCDNGYPGWQTQEACCTEFCGQCGGSGC----GALGSADCCVDNVMAAQLVCGIDTLEAPCIVPVLGDGETYAPYAAPT 250
            +G+ G+ +  GV+CCLA CG+CGGS C +  G  G D+CC  DI + G  C +  + APC++D S                    AP P+    P    XXXXXXXXXXXXXXXX                               XXXXXXXXXXXXXXXXXXXXXXXX   +  C NG PG Q+  ACC   CG CGGS C    G LG   CC   +     +C   T+ APC+V   G     +P A PT
Sbjct: 1481 NGIPGIQS--GVSCCLADCGECGGSDCDEFGGGLGADNCCESDIEEYGELCSIK-LEAPCVVDAS--------------------APAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXX--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVCSNGIPGIQSGNACCLAECGACGGSDCAEFGGGLGEDYCCQSEIEDFGELCSA-TMAAPCVVD--GSAPAPSPVAMPT 1682          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D8LSQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ5_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.220e-6
Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 MDGLEGVLADDGVTCCLAACGQCGGSGCSDIEGTEGDDCCIGDITQAGLTCGVDGVVAPCLLD 63
            M+G+EG+  ++GV CC A CGQCGG GC  + G +  +CCI  +      C V G  APC++D
Sbjct:   48 MNGIEGIN-ENGVVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNQELCSVAGA-APCVID 108          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.750e-6
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    2 DGLEGVLADDGVTCCLAACGQCGGSGCSDIEGTEGD-DCCIGDITQAGLTCGVDGVVAPCLLDESITATMSPSIAPAAASTAQPSAP 87
            +G+ GV +  GV+CCLA CG CGGSGC+++ G  G+ +CC G+I + G  C +  + APC++D S         APA +  A+P AP
Sbjct:   37 NGIPGVQS--GVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIK-LEAPCVVDAS---------APAPSPVAEPVAP 111          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 9.280e-6
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
Query:  325 CTEGVEGF-AHDVVCCPTACGQCGGSGCENIVGTAG--ASDCCSDAILISGEMCSDNGGVAPCILG 387
            C+ G+EG  A+ VVCCP ACGQCGG+GC       G   S CC   +  S E C D    APCI+G
Sbjct:  193 CSNGLEGIDANGVVCCPLACGQCGGTGCNTSGAAFGLDGSSCCGGGVKASDEYC-DETNEAPCIIG 257          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.750e-5
Identity = 33/69 (47.83%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  322 TPECTEGVEGFAHD-VVCCPTACGQCGGSGCENIVGTAGASD---CCSDAILISGEMCSDNGGVAPCIL 386
            T  C+ G+EG  H   VCCP ACGQCGGSGC +  G+A   D   CCS  +L     C D    APCI+
Sbjct:  680 TQTCSNGIEGIDHKGEVCCPLACGQCGGSGCGS-AGSANGLDGASCCSSEVLAGNVYCEDTN-AAPCII 746          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: A0A6H5JII7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII7_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.080e-5
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    2 DGLEGVLADDGVTCCLAACGQCGGSGCSDIEGTEGD-DCCIGDITQAGLTCGVDGVVAPCLLD 63
            +G+ GV +  GV+CCLA CG CGGSGC+++ G  G+ +CC G+I + G  C +  + APC++D
Sbjct:  467 NGIPGVQS--GVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIK-LEAPCVID 526          
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 5.990e-5
Identity = 33/69 (47.83%), Postives = 37/69 (53.62%), Query Frame = 0
Query:  322 TPECTEGVEGF-AHDVVCCPTACGQCGGSGCENIVGTAGAS--DCCSDAILISGEMCSDNGGVAPCILG 387
            T  C+ G+EG   + VVCCP ACGQCGG GC       G S   CC   I  S E C D    APCI+G
Sbjct:  445 TETCSNGLEGIDGNGVVCCPLACGQCGGKGCYTSGSANGLSGDSCCGGGIKASDEYC-DETNEAPCIIG 512          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12214.1902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JJ70_9PHAE3.600e-6346.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8G7_ECTSI1.310e-4542.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ60_ECTSI7.760e-748.57WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJ68_ECTSI1.030e-641.34WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LSQ5_ECTSI1.220e-644.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ69_ECTSI1.750e-642.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC43_9PHAE9.280e-648.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G651_ECTSI1.750e-547.83Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JII7_9PHAE2.080e-546.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIC5_ECTSI5.990e-547.83Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12214contigH-canaliculatus_F_contig12214:571..3574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12214.1902.1mRNA_H-canaliculatus_F_contig12214.1902.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12214 571..3577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12214.1902.1 ID=prot_H-canaliculatus_F_contig12214.1902.1|Name=mRNA_H-canaliculatus_F_contig12214.1902.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=387bp
MDGLEGVLADDGVTCCLAACGQCGGSGCSDIEGTEGDDCCIGDITQAGLT
CGVDGVVAPCLLDESITATMSPSIAPAAASTAQPSAPTPAGTVQPPTGQP
TPPSATNRPVAAPTPAQVAVAVTTAPLQTAATLDPTPAATTIVPATPLPT
AVAVPTAAPVVDTETTVAPVTEASSTCDNGYPGWQTQEACCTEFCGQCGG
SGCGALGSADCCVDNVMAAQLVCGIDTLEAPCIVPVLGDGETYAPYAAPT
PPPSPAPGAATAAPIGADATSQPSGSRGVDGATEEPTPSATGNDTDATGT
PAAPTSAPVRTSSPLGTPAPTTPECTEGVEGFAHDVVCCPTACGQCGGSG
CENIVGTAGASDCCSDAILISGEMCSDNGGVAPCILG
back to top