prot_H-canaliculatus_F_contig12207.1894.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12207.1894.1
Unique Nameprot_H-canaliculatus_F_contig12207.1894.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length285
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12207.1894.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.100e-18
Identity = 58/103 (56.31%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:  151 QISRADPSVSPLAANALLRNWFLSDGSAANAGGAGVSQGTAWEEDKGVLAWMENKAGSIKGHLKQLEFGDVSAQVM----MSDEVRSGILLRAFGVLSMDSRR 249
            Q+SRADPSV PLAA+ LL++W+LSD   A   GA       WEEDK VLAWMENKAGSIKGH++QL FG VS QV      S E     LL A G LS  +R+
Sbjct: 2175 QVSRADPSVDPLAASGLLKDWYLSD---AEVNGARP----CWEEDKAVLAWMENKAGSIKGHMEQLRFGRVSTQVSELASASPEAVLEGLLSAKGGLSKSARQ 2270
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12207.1894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K608_9PHAE1.100e-1856.31Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..284
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12207contigH-canaliculatus_F_contig12207:678..1754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12207.1894.1mRNA_H-canaliculatus_F_contig12207.1894.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12207 671..1777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12207.1894.1 ID=prot_H-canaliculatus_F_contig12207.1894.1|Name=mRNA_H-canaliculatus_F_contig12207.1894.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp
MWCALHFLFFWEYVRRASIHSHMTPPGYFLGLHPCCSFFMPGRPLSPVFL
FAAAAPAVASVAVAGADVGCFHGASPPYPFSHSYASLLWKHLDVDTHLAP
TRARRRPGVALVAQVFVQSRLRVRNFWFCLLLALILAACGEQLRYTTTPP
QISRADPSVSPLAANALLRNWFLSDGSAANAGGAGVSQGTAWEEDKGVLA
WMENKAGSIKGHLKQLEFGDVSAQVMMSDEVRSGILLRAFGVLSMDSRRR
SFGYAFVGGQLSCNQLAKQCCRLVGTVLEAHDHR*
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