prot_H-canaliculatus_F_contig12169.1870.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12169.1870.1
Unique Nameprot_H-canaliculatus_F_contig12169.1870.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length117
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12169.1870.1 vs. uniprot
Match: D7FV94_ECTSI (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV94_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 9.960e-52
Identity = 95/118 (80.51%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:    1 MCGIAFNPEDPLHSMLLFNHRSVVLMTPRRKIPSNVCVKPIKAKRPRLAEAGEKDKGQ--KSGGKRTANQSNFRMIRDFSSVVLMDFLSRNELLVLENPWESVRESLPGVLDRKQYGV 116
            + GIAFNPEDP H MLLFNHRSVVLMTPRRKIP NVCVKP KAK+PRLAE G++DK +  K+ GK  ANQSNFRMIRDFSSVVLMDFL  NELLVLENPWE+V+ESLP VLDRKQYGV
Sbjct:  707 LSGIAFNPEDPQHCMLLFNHRSVVLMTPRRKIPLNVCVKPTKAKKPRLAE-GDRDKAKTGKASGKGAANQSNFRMIRDFSSVVLMDFLGPNELLVLENPWEAVKESLPEVLDRKQYGV 823
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12169.1870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV94_ECTSI9.960e-5280.51ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12169contigH-canaliculatus_F_contig12169:856..2471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12169.1870.1mRNA_H-canaliculatus_F_contig12169.1870.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12169 256..3571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12169.1870.1 ID=prot_H-canaliculatus_F_contig12169.1870.1|Name=mRNA_H-canaliculatus_F_contig12169.1870.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=117bp
MCGIAFNPEDPLHSMLLFNHRSVVLMTPRRKIPSNVCVKPIKAKRPRLAE
AGEKDKGQKSGGKRTANQSNFRMIRDFSSVVLMDFLSRNELLVLENPWES
VRESLPGVLDRKQYGV*
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