prot_H-canaliculatus_F_contig12148.1857.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12148.1857.1
Unique Nameprot_H-canaliculatus_F_contig12148.1857.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length112
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12148.1857.1 vs. uniprot
Match: A0A6H5KJT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJT7_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 7.010e-51
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 0 
Query:    1 TRALWDTSVRYNLDEDPRRMEHHPSKDVLNSKYSASALGGSSGKPVVALSSGRHVFFHAVGDGTGKQIESVGAAHGSSGTTILSMLASKDGKLLVTTAAGDSRARLWTFP 110
            T ALWDTSVRYNLDEDPR++E H SKD +NSKYSA+ALGG   K VVALSSGRH+FF +VG+G+GKQ+ESVGAAHGSSGT+ILSMLASKDGKLL TTAAGDSRARLW FP
Sbjct:  315 TWALWDTSVRYNLDEDPRKLEQHASKDAMNSKYSAAALGGEDAK-VVALSSGRHIFFFSVGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSRARLWRFP 423
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BLAST of mRNA_H-canaliculatus_F_contig12148.1857.1 vs. uniprot
Match: A0A835Z556_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z556_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.530e-6
Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 0 
Query:    1 TRALWDTSVRYNLDEDPRRMEHHPSKDVLNSKYSASALGGSSGKPVVALSSGRHVFFHAVGDGTGKQIESVGAAHGSSGTTILSMLASKDGKLLVTTAAGDSRARLWTFP 110
            T  +WD +VRYNLDEDPR    +P  D      +  A G   G  VVA+S+G+ + + +    TG Q+  V  A G+   +I+ + + +D   +   A+G+  A LW FP
Sbjct:  385 TWRVWDITVRYNLDEDPRCQGTYP-LDATKGVPTGIAFGP--GGKVVAISAGKRLLYFSAE--TGAQVGEVADACGTG--SIVGLKSPRDAHCVAVVASGNKHAFLWKFP 487
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12148.1857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJT7_9PHAE7.010e-5180.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z556_9STRA2.530e-634.55WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12148contigH-canaliculatus_F_contig12148:3341..3676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12148.1857.1mRNA_H-canaliculatus_F_contig12148.1857.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12148 3341..3676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12148.1857.1 ID=prot_H-canaliculatus_F_contig12148.1857.1|Name=mRNA_H-canaliculatus_F_contig12148.1857.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=112bp
TRALWDTSVRYNLDEDPRRMEHHPSKDVLNSKYSASALGGSSGKPVVALS
SGRHVFFHAVGDGTGKQIESVGAAHGSSGTTILSMLASKDGKLLVTTAAG
DSRARLWTFPS*
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