prot_H-canaliculatus_F_contig1208.1801.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1208.1801.1
Unique Nameprot_H-canaliculatus_F_contig1208.1801.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length649
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1208.1801.1 vs. uniprot
Match: A0A836CA01_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA01_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.490e-14
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0 
Query:  419 GEDDSDQPLFKTLRVGETVEAQYTADDRWYKASILQTIHSGFDIARYKVKYDEYGNQETVEWTRIR 484
            GE     PL+  L++G+ VEAQYT DD WY A +LQ IHSG+ I + KV+Y +YGNQET+ W R+R
Sbjct:  561 GEGQGGVPLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYTQYGNQETILWKRVR 626
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BLAST of mRNA_H-canaliculatus_F_contig1208.1801.1 vs. uniprot
Match: W9WCS7_9EURO (Probable endonuclease LCL3 n=6 Tax=Herpotrichiellaceae TaxID=43219 RepID=W9WCS7_9EURO)

HSP 1 Score: 59.7 bits (143), Expect = 1.640e-5
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:  423 SDQPLFKTLRVGETVEAQYTADDRWYKASILQTIHSGFDIARYKVKYDEYGNQETVEWTRIRRL 486
            +DQPL    +VG+ V A++TADD+WY+A + +    G    +  + Y +YGN ETV WTR+R L
Sbjct:  690 NDQPLAGPPKVGDIVAAKFTADDQWYRARVRRVDRDG---KKADLTYLDYGNSETVPWTRLRSL 750
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1208.1801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CA01_9STRA6.490e-1454.55Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
W9WCS7_9EURO1.640e-543.75Probable endonuclease LCL3 n=6 Tax=Herpotrichiella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..189
NoneNo IPR availableGENE3D2.30.30.140coord: 419..489
e-value: 6.2E-12
score: 46.9
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 426..494
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 429..491
e-value: 7.9E-8
score: 42.0
IPR002999Tudor domainPFAMPF00567TUDORcoord: 428..490
e-value: 3.6E-4
score: 20.6
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 430..493
score: 12.941

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1208contigH-canaliculatus_F_contig1208:21620..23890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1208.1801.1mRNA_H-canaliculatus_F_contig1208.1801.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1208 21252..24499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1208.1801.1 ID=prot_H-canaliculatus_F_contig1208.1801.1|Name=mRNA_H-canaliculatus_F_contig1208.1801.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=649bp
MNSGGFTEDDQARIAEDVLGRVGGKRSGLGFSADAQTATATAFASSSGWF
DQRSEFISKEENVSIGTHDTTEGPFAWSAGQREKAGGAARKTAASRTKSD
PPQERVFPMVRDRDVQAAARDRQRSRGKSRSRSKDHCRSERVRQRDTRGG
LGRNRSRSRSRSRSNGRGRREAERRRERRREREKDVQRERASERDRQRKR
ERNMRSRSPRSRYDNGQDQSKGVKISGSVPTAEQAKAAVKRQLRKATVKD
TTLKTGATSTVGGGAGWERPEMSMASEFFTRDEISSKGGVASVAPEYEAR
LAEILQVEDEDTLSLQKEVPRTAGGAGSIGPSGLDPSTRRHHDAIFAPTL
STPEADTPLPPPATAPAPLSRSVGVGGAAARARLMLSGKLTENLMPSSEQ
APAGATKISKKSVKNAKPGEDDSDQPLFKTLRVGETVEAQYTADDRWYKA
SILQTIHSGFDIARYKVKYDEYGNQETVEWTRIRRLEPTSECFPVTKKQG
LLELEELVPEITVREDETPPPFAGMRPRQIRTDVIQENPTHDVKPETNEK
NKVPEVGDVINPAIRSSTAGRKMSWKDRVAAKKAGLPGVAEAGVRQKKQF
SLVPDFVPRRREPGNTAMDMSEWRKKVVFGMNSQKPSSDGGKKYCDGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor