prot_H-canaliculatus_F_contig1207.1795.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1207.1795.1
Unique Nameprot_H-canaliculatus_F_contig1207.1795.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length789
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1207.1795.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 6.240e-70
Identity = 551/788 (69.92%), Postives = 580/788 (73.60%), Query Frame = 0 
Query:    1 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 788
            MLEALEEGPKNAIVCT+AI+ LG+AGKW+EAV VLDGMGKGGDGSDRPDAFAYAA               ALL EMPTRRV PDVVC+G+ I ALGEVAGTQNRSTWG K +      D GG    E  +KP+A+A  D  PTRAHEKAL LI++MRREGPSPN QC+ASAITACARA DPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME+AYGV XXXXXXXXXXX            ALLNEM+E GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGLPVTKRRVEYIQ KISG      XXX      NDRS  + R  A D  A                T  +A                               GADFL ELR+RFAV+ EELA D DLDLLADD L A    GA +     SGE +    AG A  +  V+       +G+   +   G  D R                    + GD I EQ EE T    A  + E FKAM V DLK ELKGRGLRVSG KAELLARLEE+LQQPAA
Sbjct:  208 MLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGA------DEGG----EGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXXXGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGGRSXXXRK----NDRSRVQERTKAEDVVA----------------TTLRA-------------------------------GADFLEELRQRFAVETEELASDSDLDLLADDVLLA----GAIS-----SGEVKTNGEAGAATTSVDVTGA-----VGDSPVSGVDG--DDRTSEDGRSEADETVAEIADEAVRGD-ISEQGEEDTN--KAQLVLEGFKAMKVTDLKVELKGRGLRVSGNKAELLARLEEALQQPAA 915
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BLAST of mRNA_H-canaliculatus_F_contig1207.1795.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.450e-61
Identity = 550/793 (69.36%), Postives = 580/793 (73.14%), Query Frame = 0 
Query:    1 MLEALEEGPKNAIVCTMAISALGRAGKWKEAVGVLDGMGKGGDGSDRPDAFAYAAAXXXXXXXXXXXXXXALLAEMPTRRVTPDVVCYGATIAALGEVAGTQNRSTWGGKKSGGXXXXDVGGGDAWELEEKPVAAAAPDATPTRAHEKALSLIEQMRREGPSPNQQCFASAITACARAPDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMERAYGVXXXXXXXXXXXXXXXXXXXXXXXXALLNEMTEIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGLPVTKRRVEYIQEKISGXXXXXXXXXXXXXHDNDRSNAKRRGNARDTTASGGDVAQAPSPRKASSTVKKASRGAIHGGS-----VRGTAGAGGKRAEGGDGEEEEGGADFLAELRERFAVDAEELAGDDDLDLLADDALFAAGAAGAATAAPPRSGEEEKGRGAGTAIAAEAVSSTPSAPGMGEGATASSPGGPDFREXXXXXXXXXXXXXXXXXXXMTGDGIDEQEEEGTTGVAALSLPEDFKAMTVPDLKAELKGRGLRVSGKKAELLARLEESLQQPAA 788
            MLEALEEGPKNAIVCT+AI+ LG+AGKW+EAV VLDGMGKGG  SDRPDAFAYAA               ALL EMPTRRV PDVVC+G+ I ALGEVAGTQNRSTWG K +      + GG       + P+AAA     PTRAHEKAL LI+ MRREGPSPN QC+ASAITACARA DPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME+AYGV XXXXXXXXX              ALLNEM+E GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGLPVTKRRVEYIQ KISG    XXXXXXXX     RS  K R  A D                                       +G +G GG +A  G   EEE GADFL ELR+RFAV+ EELA D DLDLLADD L A    GA +      GE E    AG    +  V+       +G+   + + G  D R                    +  D I  Q E+  T  A L L E FK M V DLK ELKGRGLRVSG KAELLARLE++LQQPAA
Sbjct:   18 MLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGG--SDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGA------NEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXISGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGRXXXXXXXX-----RSRVKERTKAEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQGKSGKGGSQAADG---EEEAGADFLEELRQRFAVETEELASDSDLDLLADDVLLA----GANSY-----GEVETNGEAGAVTTSVHVTGA-----VGDSPVSGADG--DDRMPEDGRSEADETVAEIADEAVRSD-ISGQGED--TNKAQLVL-EGFKTMKVTDLKVELKGRGLRVSGNKAELLARLEKALQQPAA 774
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1207.1795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB51_ECTSI6.240e-7069.92SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KL58_9PHAE1.450e-6169.36SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 749..783
e-value: 9.5E-10
score: 48.4
IPR003034SAP domainPFAMPF02037SAPcoord: 749..782
e-value: 3.9E-13
score: 48.8
IPR003034SAP domainPROSITEPS50800SAPcoord: 749..783
score: 11.404
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 383..587
e-value: 2.1E-33
score: 118.0
coord: 143..297
e-value: 1.2E-45
score: 158.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 298..370
e-value: 9.4E-17
score: 63.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..134
e-value: 6.1E-18
score: 67.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 52..80
e-value: 0.0031
score: 17.7
coord: 482..512
e-value: 0.45
score: 10.9
coord: 15..40
e-value: 0.021
score: 15.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 151..212
e-value: 2.8E-4
score: 20.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 378..409
e-value: 6.0E-5
score: 21.0
coord: 307..340
e-value: 5.0E-7
score: 27.5
coord: 202..235
e-value: 5.1E-5
score: 21.2
coord: 447..481
e-value: 4.0E-5
score: 21.5
coord: 342..376
e-value: 1.2E-6
score: 26.3
coord: 14..38
e-value: 0.0023
score: 16.0
coord: 52..85
e-value: 1.3E-5
score: 23.0
coord: 237..270
e-value: 4.9E-6
score: 24.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 234..282
e-value: 5.4E-9
score: 36.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 305..339
score: 11.509
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 375..409
score: 10.819
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 235..269
score: 12.573
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 270..304
score: 9.405
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 480..514
score: 9.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 199..234
score: 8.879
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 410..444
score: 9.975
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 445..479
score: 10.205
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 49..83
score: 10.764
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..198
score: 9.471
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 11..45
score: 8.144
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 340..374
score: 11.729
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 311..473
e-value: 9.0E-15
score: 54.6
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 730..788
e-value: 1.9E-14
score: 54.9
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 747..784
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 12..95
coord: 371..514
coord: 146..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1207contigH-canaliculatus_F_contig1207:14955..28778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1207.1795.1mRNA_H-canaliculatus_F_contig1207.1795.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1207 14361..28845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1207.1795.1 ID=prot_H-canaliculatus_F_contig1207.1795.1|Name=mRNA_H-canaliculatus_F_contig1207.1795.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=789bp
MLEALEEGPKNAIVCTMAISALGRAGKWKEAVGVLDGMGKGGDGSDRPDA
FAYAAAINACGKAGRPVEAVALLAEMPTRRVTPDVVCYGATIAALGEVAG
TQNRSTWGGKKSGGWGGRDVGGGDAWELEEKPVAAAAPDATPTRAHEKAL
SLIEQMRREGPSPNQQCFASAITACARAPDPRSALGLLRNMREDGVPPNE
VVLNAAVDACGKGGSPDEALKLLRGMERAYGVRPDKVSYNSAISALSRAG
RAREARALLNEMTEIGLKPDKVSFAAAMQGFAAAGDPRNASSLSDEMRSS
GIEMDVVSYGTAVSACAKAGDVQGALKLIKEMQEAGVEANTVVYNSALDA
CGRAGKPKVAAKLLRKMGEAGVVPNATSYTGAIAACSRAGDGDKALEWLQ
TMTEEGIAPEAICYNYAMAACGRSGNDRQAEWLLKEMRLQGVTPNRISYS
AAMFALGKAGRLPDVLDLLEEMHREGVEADEVTYHIAVDAASIARDLGVA
MELFRDMRARGLPVTKRRVEYIQEKISGGGGGSGAVRRGGGHDNDRSNAK
RRGNARDTTASGGDVAQAPSPRKASSTVKKASRGAIHGGSVRGTAGAGGK
RAEGGDGEEEEGGADFLAELRERFAVDAEELAGDDDLDLLADDALFAAGA
AGAATAAPPRSGEEEKGRGAGTAIAAEAVSSTPSAPGMGEGATASSPGGP
DFREEEGGASGGSGGVAASSAAAMTGDGIDEQEEEGTTGVAALSLPEDFK
AMTVPDLKAELKGRGLRVSGKKAELLARLEESLQQPAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036361SAP_dom_sf
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR003034SAP_dom