prot_H-canaliculatus_F_contig1204.1783.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1204.1783.1
Unique Nameprot_H-canaliculatus_F_contig1204.1783.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length119
Homology
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.530e-57
Identity = 86/128 (67.19%), Postives = 105/128 (82.03%), Query Frame = 0
Query:    1 GTFYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGTTC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWK--------VRGFCED 117
            G FYC+GT  GGDC++LRIQS  S+D+HE+RGHGG+LYFE+TIVTSWDT  +EPQE Y+ GRS+LNC+SE+LTG  C   AK++MGECRMDIINSEIAYLG+ D+ESYG+TWK        VRGFC+D
Sbjct:   52 GVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKD 179          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.560e-57
Identity = 87/120 (72.50%), Postives = 106/120 (88.33%), Query Frame = 0
Query:    1 GTFYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGTTC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCED 117
            G FYC+GT  GGDC++LRIQS  S+D+HE+RGHGG+LYFE+TIVTSWDT  +EPQE Y+NGRS+LNC+SE+LTG  C   AK++MGECRMDIINSEIAYLG+ D+ESYG+TWKVRGFC+D
Sbjct:  503 GVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKD 622          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 9.370e-56
Identity = 80/118 (67.80%), Postives = 101/118 (85.59%), Query Frame = 0
Query:    3 FYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGTTC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCED 117
            FYC G++ GGDCDELRIQS   +D++E+RGHGG++YF +T+VTSWDT  ++PQE Y+ GRS+LNC+SE+LTG TC   AK+D GECRMDIINSE+ Y+GF DAESYG+TWKVRGFC+D
Sbjct:   33 FYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKD 150          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 2.000e-54
Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    3 FYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGTTC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCED 117
            FYCRG+ IGGDCDELRIQS    D+HE+R HGG++YFE+TIVTSWDT  + PQ  Y  GRS+LNC+SE+LTG  C   A+++MGECRMDIINSEI YLG+ D+ESYG+TWKVRGFC+D
Sbjct:  142 FYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKD 259          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 2.600e-53
Identity = 81/117 (69.23%), Postives = 99/117 (84.62%), Query Frame = 0
Query:    2 TFYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGT-TCAKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCED 117
            T YCRG  +GG+C ELRI+S S +D+ EIRGHGGNLYFE+TIVTSWD D R+PQE YK+GRS++ C+SE LTG  TCA ++MGECRMDII+SE+ YLG+D +E+YGITWKVRGFC D
Sbjct:   66 TLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 182          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.490e-52
Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    3 FYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGTTC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVR---------GFCED 117
            FYC G++ GGDCDELRIQS   +D++E+RGHGG++YF +T+VTSWDT  ++PQE Y+ GRS+LNC+SE+LTG TC   AK+DMGECRMDIINSE+ Y+GF D+ESYG+TWKVR         GFC+D
Sbjct:   78 FYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKD 204          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: D7FZV0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV0_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.680e-52
Identity = 76/109 (69.72%), Postives = 93/109 (85.32%), Query Frame = 0
Query:   10 IGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGT-TCAKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCED 117
            +GG+C ELRI+S S +D+ EIRGHGGNLYFE+TIVTSWD D R+PQE YK GRS++ C+SE LTG  TCA ++MGECRMDII+SE+ YLG+D +E+YGITWKVRGFC D
Sbjct:    3 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKGGRSFIRCVSEVLTGEDTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 111          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 6.190e-35
Identity = 66/117 (56.41%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    7 GTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGT--TC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCEDE 118
            G D GGD   LRIQS  S DY+EIRGHGG+L F +T VTSWDTD ++    YK  RS++ C+SE L     TC   A + MGECRMDII SE+  +G+D AESYGI+WKVRG+C ++
Sbjct:  462 GPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSED 578          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.210e-33
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 0
Query:    2 TFYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGT--TC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCEDE 118
            T    GT  GGD DELR+ S +++ Y  +R HGG+L F  T V SWDT    P E+  +GRSY++ +SE +T    TC   AK+ MGE RMDI NSEI YLGF D+ESYG+TWKVRGFC+D+
Sbjct:  119 TLKVYGTGEGGDADELRLLS-TTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDK 239          
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.390e-33
Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    2 TFYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTDRREPQEEYKNGRSYLNCLSERLTGT--TC---AKDDMGECRMDIINSEIAYLGFDDAESYGITWKVRGFCEDE 118
            T    GTD GGD DELR+ S S   Y  +R HGG+L F  T V SWDT    P E+  +GRSY++ +SE +T    TC   AK+ MGE RMDI NSEI YLGF D+ESYG+TWKVRGFC+D+
Sbjct:  120 TLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1204.1783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWQ2_9PHAE1.530e-5767.19MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI1.560e-5772.50Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FIU4_ECTSI9.370e-5667.80Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LRM4_ECTSI2.000e-5468.64Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FRR8_ECTSI2.600e-5369.23Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE1.490e-5262.99MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FZV0_ECTSI1.680e-5269.72Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE6.190e-3556.41MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JU98_9PHAE1.210e-3354.10MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI1.390e-3355.74Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 7..118
e-value: 6.6E-25
score: 89.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1204contigH-canaliculatus_F_contig1204:18527..20608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1204.1783.1mRNA_H-canaliculatus_F_contig1204.1783.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1204 18527..20608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1204.1783.1 ID=prot_H-canaliculatus_F_contig1204.1783.1|Name=mRNA_H-canaliculatus_F_contig1204.1783.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=119bp
GTFYCRGTDIGGDCDELRIQSRSSNDYHEIRGHGGNLYFENTIVTSWDTD
RREPQEEYKNGRSYLNCLSERLTGTTCAKDDMGECRMDIINSEIAYLGFD
DAESYGITWKVRGFCEDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold