prot_H-canaliculatus_F_contig12009.1766.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12009.1766.1
Unique Nameprot_H-canaliculatus_F_contig12009.1766.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length204
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12009.1766.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 5.550e-31
Identity = 101/211 (47.87%), Postives = 113/211 (53.55%), Query Frame = 0 
Query:    1 RATSEAVSSGSPHLRWLSQALIACRASCSSEALS-------SVLAALXXXXAAKGDPGDAGDKDRRGRKAAVWTRRLLEQLLAPSSRRG-SGAGIHRAMRDGGGXXXXXXXGEAEAAGGAARGAEANLVRRLQPESMAALMRLQVESPSPDLGWLVCLALTGSSRDRDGGTHDGGGDGVETEPGVGVGVGKEAAGLLDDEAFFQHFFVRLT 203
            RAT+ AV+SGS HLRWLSQA IACR SCSS AL        S L+         G P D  D   RG  + V  RRLLEQLLAPS RRG +G G+     D          GE        RGA  +LV  L+PES  ALMRLQVESPSP+LGWLVCLA+T  S      +  G   GV  +             LLD E FFQHFF RLT
Sbjct: 1439 RATAAAVASGSRHLRWLSQAQIACRGSCSSSALXXXXXXLLSRLSTAKTLAPVSGSP-DLLDNGLRGGASDVLARRLLEQLLAPSPRRGLAGGGVASETED--------AVGE--------RGA--SLVAGLRPESTVALMRLQVESPSPELGWLVCLAITAKS------SSSGILGGVTADTXXXXXXXXXQEDLLDAEIFFQHFFGRLT 1624
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BLAST of mRNA_H-canaliculatus_F_contig12009.1766.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.870e-30
Identity = 102/212 (48.11%), Postives = 113/212 (53.30%), Query Frame = 0 
Query:    1 RATSEAVSSGSPHLRWLSQALIACRASCSSEALSSVLAALXXXXA-------AKGDPGDAGDKDRRGRKAAVWTRRLLEQLLAPSSRRGSGAGIHRAMRDGGGXXXXXXXGEAEAAGGAARGAEANLVRRLQPESMAALMRLQVESPSPDLGWLVCLALTG-SSRDRDGGTHDGGGDGVETEPGVGVGVGKEA-AGLLDDEAFFQHFFVRLT 203
            RAT+ AV+SGS HL+WLSQA IACR SCSS ALS VLAAL    +       A G P D  D   RG  + V  RRLLEQLLAPS RRG   G                 G A           A+LV  L PES  AL+RLQVESPSP+LG LVCLA+T  SSRD             +   GV       A A LLD E FFQHFF +LT
Sbjct: 1061 RATASAVASGSRHLQWLSQAQIACRGSCSSAALSGVLAALLSRLSTTKALAPASGSP-DLLDTRLRGGASDVLARRLLEQLLAPSPRRGLAGG-----------------GVAXXXXXVVEERGASLVAGLGPESTVALVRLQVESPSPELGCLVCLAITARSSRDNS-----------DVVGGVAADTAAAAQADLLDAEIFFQHFFGKLT 1243
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12009.1766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K182_9PHAE5.550e-3147.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8A9_ECTSI1.870e-3048.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12009contigH-canaliculatus_F_contig12009:176..1485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12009.1766.1mRNA_H-canaliculatus_F_contig12009.1766.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12009 176..1487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12009.1766.1 ID=prot_H-canaliculatus_F_contig12009.1766.1|Name=mRNA_H-canaliculatus_F_contig12009.1766.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=204bp
RATSEAVSSGSPHLRWLSQALIACRASCSSEALSSVLAALLARLAAKGDP
GDAGDKDRRGRKAAVWTRRLLEQLLAPSSRRGSGAGIHRAMRDGGGGTGT
GFGGEAEAAGGAARGAEANLVRRLQPESMAALMRLQVESPSPDLGWLVCL
ALTGSSRDRDGGTHDGGGDGVETEPGVGVGVGKEAAGLLDDEAFFQHFFV
RLTR
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