prot_H-canaliculatus_F_contig11978.1728.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11978.1728.1
Unique Nameprot_H-canaliculatus_F_contig11978.1728.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length154
Homology
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 2.830e-77
Identity = 128/154 (83.12%), Postives = 141/154 (91.56%), Query Frame = 0
Query:    1 MKSELAAAGLTRLPAKNSNASVSVPGGPTSLVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEFRDERSSVKKR-SKPEASGTRLAGAEKAGVTAVPKAANPITSFFKKA 153
            +K+ELAAAGLT+LP KNS+ S +V GGPTSLVLPLARVRKTVRLDP+VGNISKEGLLLVTKATEVFMA +ADHAW IGRQTGRKSVRPCDVADFVFA+PEMYWLKDEFR+ERSSVKK+ S+PEA G + AGA KAGVTAVPK A PITSFF+KA
Sbjct:  241 VKNELAAAGLTKLPTKNSS-SAAVAGGPTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEFREERSSVKKKQSRPEAGGAKAAGATKAGVTAVPKGAKPITSFFQKA 393          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A6H5KCQ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ8_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 5.420e-15
Identity = 47/80 (58.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    1 MKSELAAAGLTRLPAKNSNASVSVPGGPTSLVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQ 80
            +K+ELAAAGL +LP KN                         RLDP+VGNISKEGLLLVTKATEVFMA M DHAWKIGRQ
Sbjct:  712 VKNELAAAGLPKLPTKN-------------------------RLDPSVGNISKEGLLLVTKATEVFMAVMTDHAWKIGRQ 766          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A7S2FZW8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZW8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.120e-13
Identity = 35/78 (44.87%), Postives = 55/78 (70.51%), Query Frame = 0
Query:   31 LVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEF 108
            +V+P+ RVR+T +LDP V NI+KE   LV KATE F+A +A+ ++KI   +GR++++  D+ D V   P+  WL+D+F
Sbjct:   90 MVIPVGRVRRTCKLDPDVKNITKEATALVAKATERFLAQIAEESFKISSLSGRRTLKTDDIRDCVNRLPQYEWLRDDF 167          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A835ZK76_9STRA (Histone-like transcription factor (CBF/NF-Y) and archaeal histone-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK76_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.090e-11
Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   28 PTSL--VLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEF 108
            P SL  V P+ R+R+ ++LDP VGN++KE   LV KA ++F+  +A  +W++  + GR++++  D+A  V A  E +W K +F
Sbjct:  271 PVSLEAVCPMGRIRRIIKLDPEVGNVTKEATALVEKAMQLFLEQLAQRSWEMCTEDGRRNIKTQDIAMCVHALDEYHWCKADF 353          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: W4H0Q5_9STRA (HMG box domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0Q5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 9.440e-11
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   31 LVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEFRDERSS--VKKRSKPEASGTRLAGAEKAGVTAVPKAANPITSFFKK 152
            L LP ARV++ +  DP V  +SK+ +L VTKATE+F+ F+A         + RK+V+  DV   + +   + WL+D+F + +      K SK  A+ + +A  E A  ++   A + ITSFF +
Sbjct:  157 LTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFPESKKVPVAAKLSKKSAAHSNVAATE-ASPSSSSSAKSKITSFFSR 279          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.540e-10
Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 0
Query:    2 KSELAAAGLTRLPAKNSNASVSVPGGPTSLVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEF--RDERSSVKKRSKPEASGTRLAGAEKAGVTAVPKAANPITSFFKKA 153
            K+EL A G+   P K + AS  V      L LP ARV++ +  D  V  +SK+ L+ +TKATE+F+ ++A   +     + RK+++  D+   +     + WL+D+F     RS+V+ ++   +S T  +G            A  I+SFF++A
Sbjct:  125 KAELLARGIDIEPEKTTVASEDV------LSLPCARVKRIINADQDVSKVSKDALIAITKATELFIKYLAAKGYDSAMISKRKTIKDSDLIQVIHGHGALDWLRDDFPQTSSRSAVEPKAAKVSSRTEPSGN-----------APSISSFFQRA 261          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A1V9ZYX4_9STRA (HMG box domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.800e-10
Identity = 29/78 (37.18%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   31 LVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEF 108
            L+LPLARV++ ++ DP VG ISK+ L+++TKATE F+ ++A         + RK+++  D+   +     + WL+D+F
Sbjct:  135 LLLPLARVKRIIQADPDVGKISKDALIVITKATEQFIQYLAAKGQDSAMISKRKTIKDSDLLQVIHGHGSLDWLRDDF 212          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A2D4BV20_PYTIN (HMG box domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV20_PYTIN)

HSP 1 Score: 63.2 bits (152), Expect = 4.540e-9
Identity = 31/94 (32.98%), Postives = 57/94 (60.64%), Query Frame = 0
Query:   34 PLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEFRDERSSVK----KRSKPEA 123
            PL RV++ ++ DP V  +S+E L+ ++KA+E+F  ++A  +++      ++ V+  DVA  +  +P + WL+D+F D + S      K SKP+A
Sbjct:   93 PLGRVKRXIQSDPDVNKVSREALVAISKASELFAQYLATKSYEQTLFNNKRQVKASDVARAIHTTPVLDWLRDDFPDMKQSAATQKTKPSKPQA 186          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: A0A8K1FA27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA27_PYTOL)

HSP 1 Score: 62.8 bits (151), Expect = 5.290e-9
Identity = 39/137 (28.47%), Postives = 75/137 (54.74%), Query Frame = 0
Query:   18 SNASVSVPGGPTS--LVLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEFRDERSSVKKRSKPEASGTRLAGAEKAGVTAVPKAANPITSFFKK 152
            +NA   V   PT    + PL RV++ ++ DP V  +S+E L+ ++KA+E+F  ++A  +++      ++ ++  DVA  +  +  + WL+++F D + +   RS    S +  A + KA  T   KA   ++SFF++
Sbjct:   78 ANAQDGVEDEPTGNVCIYPLGRVKRIIQSDPDVNKVSREALIAISKASELFAQYLATKSYEQTLYNNKRQIKASDVARAIQTTSVLDWLREDFPDVKPAAATRSNGSKSTSDTATSRKAKAT---KAG--VSSFFQQ 209          
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Match: H3GZX8_PHYRM (HMG box domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZX8_PHYRM)

HSP 1 Score: 62.0 bits (149), Expect = 7.730e-9
Identity = 27/83 (32.53%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   32 VLPLARVRKTVRLDPAVGNISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPEMYWLKDEFRDERSS 114
            + PL RVRK V+ DP VG +S++ LL ++KA+E+F  F+   +++      ++ ++  DV   +  +  + WL+++F D R S
Sbjct:   89 IYPLGRVRKMVQCDPDVGKVSRDALLAISKASELFAQFLGTKSYEQALYRNKRQLKASDVTRTIQTTASLDWLREDFPDVRPS 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11978.1728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIR0_ECTSI2.830e-7783.12HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KCQ8_9PHAE5.420e-1558.75Reverse transcriptase domain-containing protein n=... [more]
A0A7S2FZW8_9STRA1.120e-1344.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZK76_9STRA3.090e-1138.55Histone-like transcription factor (CBF/NF-Y) and a... [more]
W4H0Q5_9STRA9.440e-1134.68HMG box domain-containing protein n=2 Tax=Aphanomy... [more]
A0A1V9ZFH9_9STRA5.540e-1030.52HMG box domain-containing protein n=1 Tax=Achlya h... [more]
A0A1V9ZYX4_9STRA6.800e-1037.18HMG box domain-containing protein n=1 Tax=Thrausto... [more]
A0A2D4BV20_PYTIN4.540e-932.98HMG box domain-containing protein n=1 Tax=Pythium ... [more]
A0A8K1FA27_PYTOL5.290e-928.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GZX8_PHYRM7.730e-932.53HMG box domain-containing protein n=1 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 33..92
e-value: 2.3E-11
score: 43.8
IPR009072Histone-foldGENE3D1.10.20.10coord: 13..107
e-value: 3.8E-15
score: 58.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 25..92
NoneNo IPR availablePANTHERPTHR10252:SF79DNA POLYMERASE EPSILON SUBUNIT 4coord: 23..124
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 23..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11978contigH-canaliculatus_F_contig11978:1229..3392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11978.1728.1mRNA_H-canaliculatus_F_contig11978.1728.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11978 749..3418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11978.1728.1 ID=prot_H-canaliculatus_F_contig11978.1728.1|Name=mRNA_H-canaliculatus_F_contig11978.1728.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=154bp
MKSELAAAGLTRLPAKNSNASVSVPGGPTSLVLPLARVRKTVRLDPAVGN
ISKEGLLLVTKATEVFMAFMADHAWKIGRQTGRKSVRPCDVADFVFASPE
MYWLKDEFRDERSSVKKRSKPEASGTRLAGAEKAGVTAVPKAANPITSFF
KKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain