prot_H-canaliculatus_F_contig1194.1700.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: D7G710_ECTSI (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G710_ECTSI) HSP 1 Score: 137 bits (344), Expect = 6.130e-41 Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDSRLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRS 70
MSTGYRSSKGVLITCDVPTKQFIMSLD+RLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPR+
Sbjct: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: A0A835ZC95_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC95_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 7.960e-17 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDSRLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVR 67
MS S KGVLITCDVPTKQFI+ L+S+ A +++DLD TH+FV+ +V EI+ +LE+L E NVYVR
Sbjct: 1 MSNVRTSRKGVLITCDVPTKQFILHLNSKQAQGFIINDLDETHLFVEASAVHEIREQLERLQEMNVYVR 69
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: A0A383WPN6_TETOB (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPN6_TETOB) HSP 1 Score: 57.4 bits (137), Expect = 2.450e-9 Identity = 26/67 (38.81%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDS-----RLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 68
++ G L+TCDVPTK+F++ L++ + A ++ +LD TH+ VK+D V+ +Q +++ + KNVY P
Sbjct: 4 ATSGALLTCDVPTKEFLVWLNNQNKATKRAFIIKELDDTHLLVKEDMVEFVQEQVKAFNNKNVYTPP 70
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: A0A6T6HXU1_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HXU1_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.130e-9 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDSRLAC----VVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
+S G LITCDVPTKQ+I L+ A ++ DLDATH+ VKK + EI+R +E ++NV+
Sbjct: 36 ASAGYLITCDVPTKQYIQYLNEMKAVDKKFIIEDLDATHLLVKKKARAEIERRVESWMDENVF 98
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: A0A2V3IN38_9FLOR (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN38_9FLOR) HSP 1 Score: 57.8 bits (138), Expect = 4.410e-9 Identity = 26/62 (41.94%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDSRLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYV 66
++ GVLI+CD+P KQF++ +D + ++SDLD THV VK+ ++ I+ +L++L+E+N Y
Sbjct: 50 ATAGVLISCDIPVKQFLLHVDEKDTGKFIISDLDETHVLVKESALDYIKSQLDKLYEENQYT 111
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: M2VWH3_GALSU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWH3_GALSU) HSP 1 Score: 56.2 bits (134), Expect = 6.210e-9 Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFIMSLDSRLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
+GVLITCD+P KQFI+ LD A V+++LD T +F++ ++K +Q +LE+L+E+N +
Sbjct: 6 RGVLITCDIPMKQFILKLDEDQAPNRFVIANLDETSLFIQSWALKLVQEKLEELYEENYF 65
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: I0Z2U2_COCSC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z2U2_COCSC) HSP 1 Score: 53.1 bits (126), Expect = 1.070e-7 Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFIMSLDSRLAC----VVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPR 69
+GVL+ CDVPTK+FI+SL+ V+ DLD T +FV+ V+ +++ L++ +E+N Y PR
Sbjct: 2 RGVLLQCDVPTKEFILSLNDSKPTNERFVILDLDDTRLFVQPTVVEWLEKRLKEFNEENTYQPPR 66
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: A0A1X6PEZ7_PORUM (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEZ7_PORUM) HSP 1 Score: 52.4 bits (124), Expect = 2.050e-7 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDSRLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
++ GVL+TCDVP KQF++ LD+ A +V+ LD TH+F+ +V I+ +LE+L +N Y
Sbjct: 4 ATHGVLVTCDVPVKQFLLKLDNDRAPDRFIVAKLDETHLFIHAWAVDMIKDQLERLFAENQY 65
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: B5Y3U5_PHATC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3U5_PHATC) HSP 1 Score: 50.8 bits (120), Expect = 2.100e-6 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 8 SKGVLITCDVPTKQFIMSLDSRLAC----VVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
S G L++CDVPTKQFI L+ ++ DLDATH+ V+ + EI+R++E+ + NV+
Sbjct: 37 SAGYLVSCDVPTKQFIQHLNDLKPVDKKFILQDLDATHLLVELKARDEIRRKVEEWEDSNVF 98
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Match: A0A1Y1ILP3_KLENI (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILP3_KLENI) HSP 1 Score: 49.7 bits (117), Expect = 2.430e-6 Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFIMSLDSRLA----CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 68
KG+LI CD+P KQFI+S++ +L ++ DLD TH+FV+ +Q +++ +K Y +P
Sbjct: 6 KGILIECDIPMKQFIVSINDQLPNAQKFIIYDLDDTHLFVQPHVADMLQNKVKDFLDKITYEKP 69 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1194.1700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-canaliculatus_F_contig1194.1700.1 ID=prot_H-canaliculatus_F_contig1194.1700.1|Name=mRNA_H-canaliculatus_F_contig1194.1700.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=71bpback to top |