prot_H-canaliculatus_F_contig1193.1694.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1193.1694.1
Unique Nameprot_H-canaliculatus_F_contig1193.1694.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length217
Homology
BLAST of mRNA_H-canaliculatus_F_contig1193.1694.1 vs. uniprot
Match: A0A6H5KV47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV47_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 3.470e-97
Identity = 137/213 (64.32%), Postives = 174/213 (81.69%), Query Frame = 0
Query:    1 MSTEEDTGGGLVRPKDAAISCSHLWAYLLLVSGLAGFLMGAIIFSEWKGIGSFWVGAMAIAAGISGIYVTQAEAHGGIATGFYFFLSLVTFASSLASLILGEGAAFLVVNETDGNCFDGDDCPTDFCASEACVCWEPDGTEACAEAGSVRHCLRYGGDSCGDIGDSEGVLLGSSIVLLMVALFSLSSLLVAASTCFYCKRTIIVDSIENADAY 213
            +S EED+G G+VRPK AAISCSHLWA  L+V GL+  ++G IIF+EWKG+GSFWVGA+A+AAG SGIYVTQ EA GG+AT FY  LSLVT A+S+ S+ LGEGA FL+V + +GNC DGDDCP+DFC  +ACVCWEPDGT+ C++AGSVR+C+ +GGDSC DI DSE +LLGS I+L+++A  S  SL+VA +TC+YCKRTI+V+S E +  Y
Sbjct:   10 ISPEEDSGAGMVRPKHAAISCSHLWANALVVVGLSSVVVGVIIFTEWKGMGSFWVGAVAMAAGTSGIYVTQGEASGGLATVFYALLSLVTLAASVVSIFLGEGATFLIVRDVNGNCRDGDDCPSDFCPEDACVCWEPDGTDVCSDAGSVRYCVPFGGDSCSDIKDSENLLLGSFIILVIIAFCSFWSLVVAVNTCWYCKRTIVVESSEESPGY 222          
BLAST of mRNA_H-canaliculatus_F_contig1193.1694.1 vs. uniprot
Match: D7G5U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U1_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 2.260e-44
Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 0
Query:    7 TGGGLVRPKDAAISCSHLWAYLLLVSGLAGFLMGAIIFSEWKGIGSFWVGAMAIAAGISGIYVTQAEAHGGIATGFYFFLSLVTFASSLASLILGEGAAFLVVNETDGNCFDGDDCPTDFCASEACVCWEPDGTEACAEAGSVRHCLRYGGDSCGDIGDSEGVLLGSSIVLLMVALFSLSSLLVAASTCFYCKRTIIV 204
            +G  L RP    +  SH+  ++L+ +G A  ++GA+IF++WK  G FWVG MA+AAG++G  V+  E  GG  T  +FF S +   ++  SL+L +G  +  V  T+GNC D   C  D C    CVCWEPDG+  C +  S R CL+Y G SC +I DSE +L  S+ + +++      ++LV ++TC  CK T+++
Sbjct:   32 SGISLTRPFPRIVKASHVLGWILVAAGSAEIVVGALIFNDWKYAGGFWVGFMALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAATLSLVLVDGLVYSKVQSTEGNCVDTSSCLDDICGGYDCVCWEPDGSTDCFDGTSTRTCLQYQGSSCDEIEDSESLLAASTFLHIIIMALVAIAMLVTSATCCGCKYTVLL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1193.1694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KV47_9PHAE3.470e-9764.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5U1_ECTSI2.260e-4438.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..216
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..49
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 50..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1193contigH-canaliculatus_F_contig1193:16911..20185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1193.1694.1mRNA_H-canaliculatus_F_contig1193.1694.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1193 14841..22964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1193.1694.1 ID=prot_H-canaliculatus_F_contig1193.1694.1|Name=mRNA_H-canaliculatus_F_contig1193.1694.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=217bp
MSTEEDTGGGLVRPKDAAISCSHLWAYLLLVSGLAGFLMGAIIFSEWKGI
GSFWVGAMAIAAGISGIYVTQAEAHGGIATGFYFFLSLVTFASSLASLIL
GEGAAFLVVNETDGNCFDGDDCPTDFCASEACVCWEPDGTEACAEAGSVR
HCLRYGGDSCGDIGDSEGVLLGSSIVLLMVALFSLSSLLVAASTCFYCKR
TIIVDSIENADAYGRS*
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