prot_H-canaliculatus_F_contig1193.1692.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1193.1692.1
Unique Nameprot_H-canaliculatus_F_contig1193.1692.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length190
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1193.1692.1 vs. uniprot
Match: D7G5U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U1_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 3.150e-97
Identity = 136/189 (71.96%), Postives = 156/189 (82.54%), Query Frame = 0 
Query:    1 MLLAVGLAEVVVGSLIFKDWRVVGGFWVGVMAMVAGVAGTCVTITEHSGGFPTALFFLQSAMCLVAASLSLVLLDGLAYDKVQSTNGNCFEVSSCLENICGGYDCVCWEPDDSMECSEGTSVRKCLQYQGGDCDEVEDFESLLGTSVLLHVATIALTLVAMIVASATFCCCKYTVLLRKEDGVTRVHRL 189
            +L+A G AE+VVG+LIF DW+  GGFWVG MA+ AGVAGTCV+ITEHSGGFPTA FF QSAMCLVAA+LSLVL+DGL Y KVQST GNC + SSCL++ICGGYDCVCWEPD S +C +GTS R CLQYQG  CDE+ED ESLL  S  LH+  +AL  +AM+V SAT C CKYTVLLR+EDGVTRVHRL
Sbjct:   53 ILVAAGSAEIVVGALIFNDWKYAGGFWVGFMALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAATLSLVLVDGLVYSKVQSTEGNCVDTSSCLDDICGGYDCVCWEPDGSTDCFDGTSTRTCLQYQGSSCDEIEDSESLLAASTFLHIIIMALVAIAMLVTSATCCGCKYTVLLRREDGVTRVHRL 241
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BLAST of mRNA_H-canaliculatus_F_contig1193.1692.1 vs. uniprot
Match: A0A6H5KT21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT21_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.380e-58
Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:   31 MAMVAGVAGTCVTITEHSGGFPTALFFLQSAMCLVAASLSLVLLDGLAYDKVQSTNGNCFEVSSCLENICGGYDCVCWEPDDSMECSEGTSVRKCLQYQGGDCDEVE 137
            MA  AGVAGTCV+ITEHSGGFPTA FF QSAMCLVAA+LSLVL+DGL Y KV ST GNC E SSCL++ICGGYDCVCWEPD S +C +GTS RKCLQYQGG CD++E
Sbjct:    1 MAFAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAATLSLVLVDGLVYSKVHSTEGNCVETSSCLDDICGGYDCVCWEPDGSTDCFDGTSTRKCLQYQGGSCDDIE 107
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1193.1692.1 vs. uniprot
Match: A0A6H5KV47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV47_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 4.500e-35
Identity = 69/180 (38.33%), Postives = 105/180 (58.33%), Query Frame = 0 
Query:    2 LLAVGLAEVVVGSLIFKDWRVVGGFWVGVMAMVAGVAGTCVTITEHSGGFPTALFFLQSAMCLVAASLSLVLLDGLAYDKVQSTNGNCFEVSSCLENICGGYDCVCWEPDDSMECSEGTSVRKCLQYQGGDCDEVEDFESLLGTSVLLHVATIALTLVAMIVASATFCCCKYTVLLRKED 181
            L+ VGL+ VVVG +IF +W+ +G FWVG +AM AG +G  VT  E SGG  T  + L S + L A+ +S+ L +G  +  V+  NGNC +   C  + C    CVCWEPD +  CS+  SVR C+ + G  C +++D E+LL  S ++ V     +  +++VA  T   CK T+++   +
Sbjct:   38 LVVVGLSSVVVGVIIFTEWKGMGSFWVGAVAMAAGTSGIYVTQGEASGGLATVFYALLSLVTLAASVVSIFLGEGATFLIVRDVNGNCRDGDDCPSDFCPEDACVCWEPDGTDVCSDAGSVRYCVPFGGDSCSDIKDSENLLLGSFIILVIIAFCSFWSLVVAVNTCWYCKRTIVVESSE 217
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1193.1692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5U1_ECTSI3.150e-9771.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT21_9PHAE9.380e-5877.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV47_9PHAE4.500e-3538.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..74
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1193contigH-canaliculatus_F_contig1193:9002..12801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1193.1692.1mRNA_H-canaliculatus_F_contig1193.1692.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1193 7010..13334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1193.1692.1 ID=prot_H-canaliculatus_F_contig1193.1692.1|Name=mRNA_H-canaliculatus_F_contig1193.1692.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=190bp
MLLAVGLAEVVVGSLIFKDWRVVGGFWVGVMAMVAGVAGTCVTITEHSGG
FPTALFFLQSAMCLVAASLSLVLLDGLAYDKVQSTNGNCFEVSSCLENIC
GGYDCVCWEPDDSMECSEGTSVRKCLQYQGGDCDEVEDFESLLGTSVLLH
VATIALTLVAMIVASATFCCCKYTVLLRKEDGVTRVHRL*
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