prot_H-canaliculatus_F_contig11870.1648.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11870.1648.1
Unique Nameprot_H-canaliculatus_F_contig11870.1648.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length62
Homology
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: D7FPL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL2_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 2.010e-38
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            MIGD+CGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR
Sbjct:   46 MIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 106          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A6S8YHI5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8YHI5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.440e-22
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M GDNC +LH+MD +RMP+CRW  +C+++ C ++HE E + P+C  YQQGFC  GP CR+R
Sbjct:   86 MKGDNCEFLHQMDMDRMPVCRWGENCRIKDCPYKHEAEADKPQCVFYQQGFCYHGPECRYR 146          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A835Z272_9STRA (YT521-B-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z272_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.390e-15
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    8 YLHKMDRNRMPICRWRTDCQVE-GCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            YLH+MD ++MPIC+W   CQ    C +RH E++E  EC  Y QGFCR GP CRF+
Sbjct:   20 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFK 74          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A830HWZ4_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HWZ4_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 2.070e-14
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRW---RTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M GD CG+LH  D+ RMP+C++   + +C  EGC F+HE E     C MY+ GFC  GP CR+R
Sbjct:   92 MKGDQCGFLHCFDKERMPVCKFFMKKGECHEEGCPFKHEYE-AIKVCNMYRLGFCIHGPNCRYR 154          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: I0YR31_COCSC (Uncharacterized protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YR31_COCSC)

HSP 1 Score: 69.3 bits (168), Expect = 3.480e-14
Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRWRT---DCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M G+ CG+LH++D  RMP+CR      +C+   C F+H  E E  EC MY+ GFC  GP CRFR
Sbjct:   13 MKGEECGFLHQLDPQRMPVCRTLLKFGECKDPECPFKHNLE-EVKECNMYKLGFCVYGPRCRFR 75          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A7S3LNM7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LNM7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.570e-14
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    5 NCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            NC +LH+++  RMP CRW   CQV  C F+H +EQ+  EC  Y  GFC  G  CR+R
Sbjct:   57 NCEFLHELNPERMPECRWGEKCQVPDCMFKHTKEQDRLECTYYALGFCMHGSACRYR 113          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A7S0X4X5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X4X5_9CHLO)

HSP 1 Score: 68.6 bits (166), Expect = 5.140e-13
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRWRT---DCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M G+NCG+LH+ D+ RMP CR+     +C+   C F+H  E +  +C M++ GFC  GP CR+R
Sbjct:   51 MKGNNCGFLHQFDKQRMPTCRFYAKYNECKEPDCPFKHSLE-DVKDCNMFKLGFCIHGPNCRYR 113          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A8J9WKS2_9CHLO (Probable cleavage and polyadenylation specificity factor subunit 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKS2_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 6.330e-13
Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRWRT---DCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M GD CG+LH++D  RMP+CR      +C+   C F+H+   E  EC MY+ GFC  GP CRFR
Sbjct:   66 MKGDECGFLHQLDPQRMPVCRTLLKFGECKDPECQFKHDLG-EVKECNMYKLGFCVYGPRCRFR 128          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A7S0DDM2_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DDM2_MICPS)

HSP 1 Score: 68.2 bits (165), Expect = 2.530e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRW---RTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M G++CG+LH+ D+ RMP CR+     +C+   C F+H  E +  +C MY+ GFC  GP CR+R
Sbjct:   55 MKGNDCGFLHQFDKQRMPTCRFFAKYNECKEPDCPFKHSLE-DVKDCNMYKLGFCIHGPNCRYR 117          
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Match: A0A7S0R105_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R105_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 7.720e-12
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 MIGDNCGYLHKMDRNRMPICRWRT---DCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR 61
            M GD CG+LH+ D  +MPICR      +C+   C F+H  + E  EC MY+ GFC  GP CR++
Sbjct:   64 MKGDQCGFLHQFDVEKMPICRNLLKFGECKELDCPFKHTTD-EIKECNMYKLGFCIYGPACRYK 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11870.1648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPL2_ECTSI2.010e-3898.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S8YHI5_9STRA1.440e-2254.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835Z272_9STRA7.390e-1554.55YT521-B-like domain-containing protein n=1 Tax=Tri... [more]
A0A830HWZ4_9CHLO2.070e-1448.44Uncharacterized protein n=2 Tax=Pycnococcus provas... [more]
I0YR31_COCSC3.480e-1448.44Uncharacterized protein (Fragment) n=1 Tax=Coccomy... [more]
A0A7S3LNM7_9STRA6.570e-1449.12Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S0X4X5_9CHLO5.140e-1343.75Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A8J9WKS2_9CHLO6.330e-1348.44Probable cleavage and polyadenylation specificity ... [more]
A0A7S0DDM2_MICPS2.530e-1243.75Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S0R105_9CHLO7.720e-1245.31Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 1..41
e-value: 1.0E-6
score: 30.5
NoneNo IPR availablePANTHERPTHR23102:SF24CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 4-RELATEDcoord: 3..61
NoneNo IPR availablePANTHERPTHR23102ZINC FINGER CLIPPER -RELATEDcoord: 3..61
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 38..61
score: 10.784

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11870contigH-canaliculatus_F_contig11870:299..907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11870.1648.1mRNA_H-canaliculatus_F_contig11870.1648.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11870 299..937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11870.1648.1 ID=prot_H-canaliculatus_F_contig11870.1648.1|Name=mRNA_H-canaliculatus_F_contig11870.1648.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=62bp
MIGDNCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQG
FCRQGPTCRFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH