prot_H-canaliculatus_F_contig11823.1613.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11823.1613.1
Unique Nameprot_H-canaliculatus_F_contig11823.1613.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length211
Homology
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 3.670e-89
Identity = 146/183 (79.78%), Postives = 160/183 (87.43%), Query Frame = 0
Query:   29 RHSNVFGLMAEKGYLWVSHTRAAAGXXXXXXNKAAVLYRVARDAPLGVLLASDPMLARPLRLALHGLVMRLLVDQEFKRDFALAFARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVRLLADASAETPSQLLPNPDGGVPKVWRFSETPGLLALLVKALVRTLWDAECRGCGLEGDRKA 211
            RHS++FGL    GYLWVSHTRA            AV YRVARD+PLGVL+ASDPMLA+PLRL+LHGL+MRLLVDQEFKRDFALAFARLYE+LN+LYCKG+GV+DESIFGFSVQTFTTPSLVRLLADASAETPS +LPNPD GVPKVWRFSETPGLLALL KALVRT+WDA CRGCG EG R+A
Sbjct:  492 RHSSMFGLSTNLGYLWVSHTRAGGSK--------AVPYRVARDSPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCRGCGREGGREA 666          
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 2.610e-82
Identity = 141/183 (77.05%), Postives = 156/183 (85.25%), Query Frame = 0
Query:   29 RHSNVFGLMAEKGYLWVSHTRAAAGXXXXXXNKAAVLYRVARDAPLGVLLASDPMLARPLRLALHGLVMRLLVDQEFKRDFALAFARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVRLLADASAETPSQLLPNPDGGVPKVWRFSETPGLLALLVKALVRTLWDAECRGCGLEGDRKA 211
            RHS++FGL    GYLWVSHTRA            AV YRVARD+PL VL+ASDPM+A+PLRL LHGL+MRLLVDQEFKRDFALAFARLYE+LN+LYCKG+GV+DESIFGFSVQTFTTPSLVRLLADASA TPS +LPNPD GVPKVWRFSETPGLLALL +ALVRT+ DA CRGCG EG R+A
Sbjct:  125 RHSSMFGLSTNLGYLWVSHTRAGGSE--------AVPYRVARDSPLVVLVASDPMIAKPLRLCLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAATPSAILPNPDLGVPKVWRFSETPGLLALLAEALVRTMRDAGCRGCGREGGREA 299          
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 8.480e-18
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   73 PLGVLLASDPMLARPLRLALHGLVMRLLVDQEFKRDFALAFARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVRLLADAS---AETPSQLLPNPDGGVPKVWRFSETPGLLALLVKALVRTLWDAECRGCGLEGDRKA 211
            PL +L+ +DP+L +  R A H L MRLL D  FKR FA AF R +  L+ L+ +G+G + ES+FGFSVQ FTTPSLV+LL   S   +E  S L+      +P+        G+L   +    RT       G G EGD+ A
Sbjct:  432 PLLLLMLADPLLLKQQRSAAHALFMRLLTDAAFKRAFAAAFGRAFRALHALFARGVGTSSESLFGFSVQIFTTPSLVQLLDGGSGDASELCSALVEAGKSPLPE----GSAQGMLVQCLLDSFRTAGCGRQGGEGAEGDKDA 569          
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 6.940e-13
Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 0
Query:   70 RDAPLGVLLASDPMLARPLRLALHGLVMRLLVDQEFKRDFALAFARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVRLLADASAETPSQLLPNPDGGVPKVWRFSETPGLLALLVKALV 192
            + + L +LL +D  L   LR  L  L + LLVD  FK   A +  R Y  LN+LY +G+G  D+S+F FSVQ +TTPS+VR LA ++ +   +LL               +PGL+ +L +AL+
Sbjct:  435 QSSRLALLLVADFFLTNQLRTELQALYLHLLVDAHFKPALARSLTRCYALLNSLYSRGVGTQDDSLFSFSVQLYTTPSIVRWLATSTED--EELL--------------GSPGLMRVLTEALL 541          
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Match: B8C846_THAPS (E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C846_THAPS)

HSP 1 Score: 61.6 bits (148), Expect = 1.750e-7
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0
Query:   68 VARDAPLGVLLASDPMLARPLRLALHGLVMRLLVDQEFKRDFALAF-ARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVRLLADASA 157
            +A  +P+  LL  DP  ++ LR  L  L + LL D  FK  FA +  A +Y   +TL+C G+G   +++ GF+VQ FTT SLV+ L +  A
Sbjct: 1082 MAPTSPVLTLLLLDPYASKNLRSCLQRLFLSLLTDARFKSRFAASLGAVVYRPTSTLFCAGVGTDADTLLGFTVQLFTTGSLVKALGNLDA 1172          
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Match: A0A7S2PF59_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PF59_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 9.900e-7
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0
Query:   68 VARDAPLGVLLASDPMLARPLRLALHGLVMRLLVDQEFKRDFALAF-ARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVRLLADASA 157
            +A  +PL ++L  DP   + LR  LH L + LL +  FK  FA +  A +Y   + L+C GIG   +++ GF+VQ FTT SL++ L +  A
Sbjct:  983 LAPTSPLLLILLLDPYSPKLLRSNLHRLFLSLLTNPRFKSRFAASLGAVVYRPTSNLFCAGIGTEADTLLGFTVQLFTTGSLIKALGNLEA 1073          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11823.1613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G3D3_ECTSI3.670e-8979.78E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5K8R4_9PHAE2.610e-8277.05E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A836CB31_9STRA8.480e-1841.55E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A4D9D1X7_9STRA6.940e-1338.21E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
B8C846_THAPS1.750e-739.56E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira ... [more]
A0A7S2PF59_9STRA9.900e-738.46E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ske... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11823contigH-canaliculatus_F_contig11823:48..3256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11823.1613.1mRNA_H-canaliculatus_F_contig11823.1613.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11823 48..3257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11823.1613.1 ID=prot_H-canaliculatus_F_contig11823.1613.1|Name=mRNA_H-canaliculatus_F_contig11823.1613.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=211bp
GGSSPASWEPIQALGQRQQEQEQQERRLRHSNVFGLMAEKGYLWVSHTRA
AAGSGGGGGNKAAVLYRVARDAPLGVLLASDPMLARPLRLALHGLVMRLL
VDQEFKRDFALAFARLYEFLNTLYCKGIGVTDESIFGFSVQTFTTPSLVR
LLADASAETPSQLLPNPDGGVPKVWRFSETPGLLALLVKALVRTLWDAEC
RGCGLEGDRKA
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