prot_H-canaliculatus_F_contig1182.1610.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1182.1610.1
Unique Nameprot_H-canaliculatus_F_contig1182.1610.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length444
Homology
BLAST of mRNA_H-canaliculatus_F_contig1182.1610.1 vs. uniprot
Match: D7G4V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4V7_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.020e-106
Identity = 236/459 (51.42%), Postives = 295/459 (64.27%), Query Frame = 0
Query:    6 RKPPWVPSALRNIS---AESDSGHGGGXXXXXGSDAARTKSAGVENNRGERSPAADAARQSLQPHHAAESGVRSPALQAF-----PSILAPAYSGTTAFPGSRAALPYGDH------SNG-----NTA------PFRRGSSITEERVAEAQANAEMMQRLSSDIGTVEARILGVEKELEDAQEAVANGGSYRGKSGDRLAAEEVRLGQKERLLRXXXXXXXXXXLALLRMQSSRSDQKRGPEARKGRVSFIMTQSHVDDPSEELAEQRRMTQVQDLIKERRMS-SAGGDVGDEAGDDTIVHIHRIEEDPLLLVRLNAFGLPILVSTLVSGFTLVLFDVAKTDLARRLAVLSFALEMSSSIVLCLIAFRGQQLYSHATDIKPLTRRFLQKMCNVTVLSLVLFSLGVMAFVVAFVVEASEEMGTPWLGVLALALLPTILAGIMFAASTAQVRRHSFPSSSP 438
            RK  WVPSAL N+S    +SD G+GGG     G+++ R   A  E+N+  R P + AARQ+  P         +PA   F      +  A A+SG T  P   A  P G        SN      NTA      P+R GSS+T+ R ++  A  E + +L+ DI   EA I GV+++LE+ Q A+   GSYRGK G  LA+ E RLG +ERLLR     XXXXX  L R  ++  +Q+RG E                       EQRRM++VQ+LI+ERR S ++   +GDEAG+DT+  IH++EED  LLVRL+AF +PILV+TL+SGFTL+LFDVAKTDLARRLAVLSF LE SSS +LCLI+FRGQQLY+H+TDIKPLTRRFL+KMCNVTVL+LVLFSLGV+AFVV+FVVEASEE+G  WL VL L L PT+LAG+MF  ST QVRRHS  S  P
Sbjct:    6 RKLSWVPSALSNVSNVSVQSD-GNGGGLA---GTESPR---APPEHNQN-RQPRSSAARQAFGPV-----STLAPAYDPFGDPAAAAAAAVAFSGETVAP-INATRPIGTADGTVATSNSVSTPPNTADVADPIPYRPGSSMTDRRRSDVHAVLETVNQLAQDIAAKEAEISGVKQDLENVQGAIEVSGSYRGKEGGALASVEERLGHRERLLREEKAQXXXXXXXLSRFLNAVPEQRRGSE-----------------------EQRRMSRVQELIRERRQSVNSSEQLGDEAGEDTVFEIHKMEEDSRLLVRLSAFNVPILVATLLSGFTLLLFDVAKTDLARRLAVLSFGLETSSSTMLCLISFRGQQLYAHSTDIKPLTRRFLRKMCNVTVLALVLFSLGVIAFVVSFVVEASEELGVGWLAVLGLVLCPTMLAGLMFVISTVQVRRHSIESVPP 427          
BLAST of mRNA_H-canaliculatus_F_contig1182.1610.1 vs. uniprot
Match: D7FS41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS41_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 2.020e-9
Identity = 43/155 (27.74%), Postives = 86/155 (55.48%), Query Frame = 0
Query:  249 RMTQVQDLIKERRMSSAGGDVGDEAGDDTIVHIHRIEEDPLLLVRLNAFGLPILVSTLVSGFTLVLFDVAKTDLARRLAVLSFALEMSSSIVLCLIAFRGQQLYSHATDIKPLTRRFLQKMCNVTVLSLVLFSLGVMAFVVAFVVEASEEMGTPW 403
            R+ +  +L+     ++ G D G   G+         E+D +L  R+++F + I+VSTL++GF++   + A+ D+ R +  + FALEM ++I   +I+F  +Q +++ +     T RF+  +  +T  S   +++G++ FVV  ++EA+    T W
Sbjct:   95 RLQERTNLLLTTTRTARGEDGGSSDGEQPSATDSEAEDDRILQ-RVDSFSILIVVSTLITGFSIPTIEQAQLDVTRSIMTMVFALEMFATIFFSIISFYAKQAFNYGSTNNHRTARFMYHVRWITFSSQACYTIGILLFVVGILLEATIGYDTYW 248          
BLAST of mRNA_H-canaliculatus_F_contig1182.1610.1 vs. uniprot
Match: A0A6H5JK33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK33_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.550e-9
Identity = 38/118 (32.20%), Postives = 71/118 (60.17%), Query Frame = 0
Query:  286 EDPLLLVRLNAFGLPILVSTLVSGFTLVLFDVAKTDLARRLAVLSFALEMSSSIVLCLIAFRGQQLYSHATDIKPLTRRFLQKMCNVTVLSLVLFSLGVMAFVVAFVVEASEEMGTPW 403
            ED  +L R+++F + I+VSTLV+GF++   + A+  + R +  L FALEM ++I   +I+F  +Q +++ +     T RF+  +  +T  S   +++G++ FVV  ++EA+    T W
Sbjct:   26 EDERILQRVDSFSILIVVSTLVTGFSIPSIEQAQLGITRSIMTLVFALEMFATIFFSIISFYAKQAFNYGSTNNHRTARFMYHVRWITFSSQACYTIGILLFVVGILLEATIGYDTYW 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1182.1610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4V7_ECTSI1.020e-10651.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FS41_ECTSI2.020e-927.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK33_9PHAE7.550e-932.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 424..443
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..348
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..289
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 349..368
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 316..326
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 403..423
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 392..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..315
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..391
NoneNo IPR availableTMHMMTMhelixcoord: 326..348
NoneNo IPR availableTMHMMTMhelixcoord: 369..391
NoneNo IPR availableTMHMMTMhelixcoord: 289..311
NoneNo IPR availableTMHMMTMhelixcoord: 401..423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1182contigH-canaliculatus_F_contig1182:10410..15423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1182.1610.1mRNA_H-canaliculatus_F_contig1182.1610.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1182 8023..18751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1182.1610.1 ID=prot_H-canaliculatus_F_contig1182.1610.1|Name=mRNA_H-canaliculatus_F_contig1182.1610.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=444bp
MMEAPRKPPWVPSALRNISAESDSGHGGGGDGAGGSDAARTKSAGVENNR
GERSPAADAARQSLQPHHAAESGVRSPALQAFPSILAPAYSGTTAFPGSR
AALPYGDHSNGNTAPFRRGSSITEERVAEAQANAEMMQRLSSDIGTVEAR
ILGVEKELEDAQEAVANGGSYRGKSGDRLAAEEVRLGQKERLLREEKVQL
REEKLALLRMQSSRSDQKRGPEARKGRVSFIMTQSHVDDPSEELAEQRRM
TQVQDLIKERRMSSAGGDVGDEAGDDTIVHIHRIEEDPLLLVRLNAFGLP
ILVSTLVSGFTLVLFDVAKTDLARRLAVLSFALEMSSSIVLCLIAFRGQQ
LYSHATDIKPLTRRFLQKMCNVTVLSLVLFSLGVMAFVVAFVVEASEEMG
TPWLGVLALALLPTILAGIMFAASTAQVRRHSFPSSSPTPGTQ*
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