prot_H-canaliculatus_F_contig11813.1607.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11813.1607.1
Unique Nameprot_H-canaliculatus_F_contig11813.1607.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length83
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11813.1607.1 vs. uniprot
Match: D8LLF1_ECTSI (Kinesin (KAR3 subfamily) (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 5.720e-26
Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = 0 
Query:    1 QPSSFVSEEVSEEVSSVTVTSAACGCQHELGCAIGAFGGQLPAGENGTSIEVRDRLKELQGRTSMLEQEK 70
            +PSS VSEEVSEE SSVTVTSAACGC H+ GCAIGA GGQ+PAGENG S+EVRDRLKELQGRTS LEQEK
Sbjct:  494 EPSSVVSEEVSEE-SSVTVTSAACGCHHQHGCAIGAIGGQMPAGENGFSVEVRDRLKELQGRTSTLEQEK 562
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11813.1607.1 vs. uniprot
Match: A0A6H5KIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW8_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 4.370e-25
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 
Query:    4 SFVSEEVSEEVSSVTVTSAACGCQHELGCAIGAFGGQLPAGENGTSIEVRDRLKELQGRTSMLEQEKAR 72
            S VSEEVSEE SSVTVTSAACGC H+ GCAIGA GGQ+PAG+NG S+EVRDRLKELQGRTS LEQEKAR
Sbjct:  513 SVVSEEVSEE-SSVTVTSAACGCHHQHGCAIGAIGGQMPAGDNGFSVEVRDRLKELQGRTSTLEQEKAR 580
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11813.1607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLF1_ECTSI5.720e-2684.29Kinesin (KAR3 subfamily) (Partial) (Fragment) n=1 ... [more]
A0A6H5KIW8_9PHAE4.370e-2584.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11813contigH-canaliculatus_F_contig11813:128..376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11813.1607.1mRNA_H-canaliculatus_F_contig11813.1607.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11813 128..376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11813.1607.1 ID=prot_H-canaliculatus_F_contig11813.1607.1|Name=mRNA_H-canaliculatus_F_contig11813.1607.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=83bp
QPSSFVSEEVSEEVSSVTVTSAACGCQHELGCAIGAFGGQLPAGENGTSI
EVRDRLKELQGRTSMLEQEKARGMQDKGAENK*
back to top