prot_H-canaliculatus_F_contig1181.1602.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1181.1602.1
Unique Nameprot_H-canaliculatus_F_contig1181.1602.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length104
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1181.1602.1 vs. uniprot
Match: D7G1B1_ECTSI (Calmodulin-like myosin-light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B1_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 8.780e-49
Identity = 94/104 (90.38%), Postives = 98/104 (94.23%), Query Frame = 0 
Query:    2 KVDAELLALEGAPSVSAALRALRVSPSS-PDIPPPPAAVRAAAELLLAYVTNALRDPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTAVGFEPRDRGAVFVLRE 104
            +VDAELLALEG PSVSA+LRALR SPSS PD PPP AAVRAAAELLLAYVTNAL+DPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTA+GFEPRDRG VFVLRE
Sbjct: 1052 EVDAELLALEGTPSVSASLRALRESPSSSPDTPPPAAAVRAAAELLLAYVTNALQDPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTAIGFEPRDRGTVFVLRE 1155
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BLAST of mRNA_H-canaliculatus_F_contig1181.1602.1 vs. uniprot
Match: A0A6H5KUV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV1_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.470e-47
Identity = 92/104 (88.46%), Postives = 94/104 (90.38%), Query Frame = 0 
Query:    2 KVDAELLALEGAPSVSAALRALRVSPSS-PDIPPPPAAVRAAAELLLAYVTNALRDPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTAVGFEPRDRGAVFVLRE 104
            KVDAELLALEGAPSVSAALRALR SPSS PD P     VRAAAELLLAYVTNAL+DPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTA+GFEPR RG VFVLRE
Sbjct:   18 KVDAELLALEGAPSVSAALRALRESPSSSPDTPXXXXXVRAAAELLLAYVTNALQDPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTAIGFEPRGRGTVFVLRE 121
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BLAST of mRNA_H-canaliculatus_F_contig1181.1602.1 vs. uniprot
Match: A0A482SU41_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU41_9ARCH)

HSP 1 Score: 61.2 bits (147), Expect = 1.000e-8
Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 0 
Query:    2 KVDAELLALEGAPSVSAALRALRVSPSSPDIPPPPAAVRAAAELLLAYVTNALRDPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTAVGF 91
            ++ +E+ ALEGAPS+SAA+R +R+  S  +       VR   E  L  V N L +P + ++ RV+  NP FQR LGRL G E  M A+G+
Sbjct:  546 ELRSEICALEGAPSISAAVREMRLHHSLTE-------VRLGLETALKIVQNVLGNPHDIKMFRVKKANPVFQRDLGRLRGAELLMNAIGY 628
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1181.1602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1B1_ECTSI8.780e-4990.38Calmodulin-like myosin-light chain n=1 Tax=Ectocar... [more]
A0A6H5KUV1_9PHAE1.470e-4788.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SU41_9ARCH1.000e-842.22Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.2190coord: 34..104
e-value: 1.8E-13
score: 52.0
IPR018997PUB domainPFAMPF09409PUBcoord: 38..94
e-value: 1.7E-11
score: 43.9
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 36..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1181contigH-canaliculatus_F_contig1181:840..1151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1181.1602.1mRNA_H-canaliculatus_F_contig1181.1602.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1181 840..1151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1181.1602.1 ID=prot_H-canaliculatus_F_contig1181.1602.1|Name=mRNA_H-canaliculatus_F_contig1181.1602.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=104bp
PKVDAELLALEGAPSVSAALRALRVSPSSPDIPPPPAAVRAAAELLLAYV
TNALRDPRNPRVHRVRSGNPAFQRALGRLGGCEGAMTAVGFEPRDRGAVF
VLRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036339PUB-like_dom_sf
IPR018997PUB_domain