prot_H-canaliculatus_F_contig11727.1535.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11727.1535.1
Unique Nameprot_H-canaliculatus_F_contig11727.1535.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length114
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11727.1535.1 vs. uniprot
Match: D8LSN2_ECTSI (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.210e-26
Identity = 83/128 (64.84%), Postives = 89/128 (69.53%), Query Frame = 0 
Query:    1 ISEQAYVSWLLGGGAXXXXXXXXXXXXXXXXXXX-------DASDTYAERSFLSPDTSYMAEVGAWGVVQACLDEYHQRRSATNTVAVGANTKQG---------EVLPRAATLLPEAGPALLSAYESR 112
            +S+QAYV+WLLGGGA   XXXXXXXXXXXXXXXX            Y ERS LSPDTSYMAE GAW VVQACLDEYHQRRS    VA G+    G         E+LPRA  LLPEAGPALLSAYE+R
Sbjct: 1087 MSQQAYVTWLLGGGAAEEXXXXXXXXXXXXXXXXXXXXDRASGGKAYTERSTLSPDTSYMAEAGAWSVVQACLDEYHQRRSVA--VATGSGNADGGSAATAGSTEMLPRAVGLLPEAGPALLSAYEAR 1212
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11727.1535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN2_ECTSI4.210e-2664.84Conserved oligomeric Golgi complex subunit 5 n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11727contigH-canaliculatus_F_contig11727:2656..3169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11727.1535.1mRNA_H-canaliculatus_F_contig11727.1535.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11727 2656..3169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11727.1535.1 ID=prot_H-canaliculatus_F_contig11727.1535.1|Name=mRNA_H-canaliculatus_F_contig11727.1535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=114bp
ISEQAYVSWLLGGGAAEEGKAREEKGAEAAGGGGDASDTYAERSFLSPDT
SYMAEVGAWGVVQACLDEYHQRRSATNTVAVGANTKQGEVLPRAATLLPE
AGPALLSAYESRA*
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