prot_H-canaliculatus_F_contig1168.1486.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1168.1486.1
Unique Name	prot_H-canaliculatus_F_contig1168.1486.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	244

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1168.1486.1 vs. uniprot
Match: D7FLT5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT5_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 7.500e-57
Identity = 118/245 (48.16%), Postives = 148/245 (60.41%), Query Frame = 0

Query:    1 MERDQASREQLANRRPAADSWIPAEASPQPQLDDSFHPETFVNMGQDMG-QETEQEMPLTAESSFQPPADAS-PSVSISTLDSPDSVPLAPVAHRAGSPLSQRVVLGLLAVVVALLGTNAYYFNQAHAWKVHRLDCWCYEGIHTSRYTIHDTRCRHSRVAKLEKDSAT----PKIDVDPLATPPSCPGSQLIDTCWFKVGWGDCTKEVIEDPIKPVEDAFRLAWDSTTEVVGFVVDTIASDFREV 239
            MER+QA REQ+ANR    DSW+P +AS Q QLDDSFHP+TFVN+G  +  QE+ +    T+E+S Q P  A+  SVS  T     S PL   +  +G   + R+VLGLLAVVV LLGTNAY +NQ+ AWK                    +T     +V KLE  + T    P       +T  +CPGSQLIDTCWFKVGWGDC  E +EDP+KP+EDAFR A DS + V+G V +T ASD  +V
Sbjct:    1 MEREQAVREQVANRGLMGDSWVPTDASEQ-QLDDSFHPDTFVNVGNFLSSQESSERARSTSETSSQTPPPATIASVSTVTHVVDPSAPL--TSLLSGGSRAGRIVLGLLAVVVMLLGTNAYSYNQSRAWKA-------------------ETSSLREKVGKLEAAARTSASKPTWSTSTSST--TCPGSQLIDTCWFKVGWGDCANEALEDPVKPIEDAFRFALDSASGVIGAVTETFASDMSQV 221

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1168.1486.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1168.1486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FLT5_ECTSI	7.500e-57	48.16	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 102..121
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 122..243
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..101
None	No IPR available	TMHMM	TMhelix		coord: 102..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1168	contig	H-canaliculatus_F_contig1168:16110..19150 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1168.1486.1	mRNA_H-canaliculatus_F_contig1168.1486.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1168 16110..20149 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1168.1486.1 ID=prot_H-canaliculatus_F_contig1168.1486.1|Name=mRNA_H-canaliculatus_F_contig1168.1486.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=244bp
MERDQASREQLANRRPAADSWIPAEASPQPQLDDSFHPETFVNMGQDMGQ
ETEQEMPLTAESSFQPPADASPSVSISTLDSPDSVPLAPVAHRAGSPLSQ
RVVLGLLAVVVALLGTNAYYFNQAHAWKVHRLDCWCYEGIHTSRYTIHDT
RCRHSRVAKLEKDSATPKIDVDPLATPPSCPGSQLIDTCWFKVGWGDCTK
EVIEDPIKPVEDAFRLAWDSTTEVVGFVVDTIASDFREVKRAT*