prot_H-canaliculatus_F_contig11672.1482.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11672.1482.1
Unique Nameprot_H-canaliculatus_F_contig11672.1482.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length338
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11672.1482.1 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.080e-59
Identity = 229/338 (67.75%), Postives = 237/338 (70.12%), Query Frame = 0 
Query:    1 MGGQQRGDLSSAHARFQDDFHHRGRAADKAATERGEAAGGGGRSASRPVQVLYTKNWRGEEVVVEIEQSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ALPTFLKGSVISGNADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQSEAXXXXXXXXXXENGARSGTNGREDAWWEVEDDADGVXXXXXXXXXKGGEAGAQNRXXERDPGAGATELLGLAAGVGAGARFRVGVRIVPIEALTVEDAARMSAEEYTRFYNLVVGE 332
            MGGQQRGD+SSAHARFQDDFHHRGRAADKAA ERG A   GGR++SRPVQVLYTKNWRGEEVVVEIEQS XXXXXXXXXX   XXXXXXXXXXXXX                 XXXXXXX      ALPTFLKGS ISGN +    XXXXXXXXXXXXXXXXXXXXXXXX             ARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQ   XXXXXXXXXX                         XXXXXXXX KG     Q R   R        LLGL+AGVGAG RFRVGVR VPIEALT ED A+MSAE+YTRFYN+VVGE
Sbjct:  236 MGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAA---GGRASSRPVQVLYTKNWRGEEVVVEIEQSXXXXXXXXXXXAEGXXXXXXXXXXXXXGLLLPSRAALKRKAADAXXXXXXXXXRAKKALPTFLKGSAISGNYNNTADXXXXXXXXXXXXXXXXXXXXXXXX-------------ARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXRKGAP---QARTSAR--------LLGLSAGVGAGQRFRVGVRFVPIEALTEEDIAKMSAEDYTRFYNVVVGE 539
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BLAST of mRNA_H-canaliculatus_F_contig11672.1482.1 vs. uniprot
Match: D8LCF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF2_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 7.590e-56
Identity = 239/333 (71.77%), Postives = 245/333 (73.57%), Query Frame = 0 
Query:    1 MGGQQRGDLSSAHARFQDDFHHRGRAADKAATERGEAAGGGGRSASRPVQVLYTKNWRGEEVVVEIEQSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPTFLKGSVISGNADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQSEAXXXXXXXXXXENGARSGTNGREDAWWEVEDDADGVXXXXXXXXXKGGEAGAQNRXXERDPGAGATELLGLAAGVGAGARFRVGVRIVPIEALTVEDAARMSAEEYTRFYNLVVGER 333
            MGGQQRGD+SSAHARFQDDFHHRGRAADKAA ERG A   GGR++SRPVQVLYTKNWRGEEVVVEIEQSE XXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       HARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQS  XXXXXXXXXX                         XXXXXXXX KG     Q R   R        LLGL+AGVGAG RFRVGVR VPIEALT ED A+MSAE+YTRFYN VVGER
Sbjct:   34 MGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAA---GGRASSRPVQVLYTKNWRGEEVVVEIEQSEDXXXXXEDWDAEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQ-----HARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXRKGAP---QARSSAR--------LLGLSAGVGAGQRFRVGVRFVPIEALTEEDIAKMSAEDYTRFYNAVVGER 340
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11672.1482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCE2_9PHAE1.080e-5967.75HTH TFE/IIEalpha-type domain-containing protein n=... [more]
D8LCF2_ECTSI7.590e-5671.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11672contigH-canaliculatus_F_contig11672:263..1757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11672.1482.1mRNA_H-canaliculatus_F_contig11672.1482.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11672 164..2920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11672.1482.1 ID=prot_H-canaliculatus_F_contig11672.1482.1|Name=mRNA_H-canaliculatus_F_contig11672.1482.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=338bp
MGGQQRGDLSSAHARFQDDFHHRGRAADKAATERGEAAGGGGRSASRPVQ
VLYTKNWRGEEVVVEIEQSEDDEDDDDDDDGEEGGGGGEASALLPSRAAL
KRKAADAAAKEEEAAKRAKKALPTFLKGSVISGNADGGGGDSDGGGGDED
EDDDDHSSGGSSTSKRAQAAAAAAAGHARRLGVAAVTSVAERDEMKKRLR
PWTERMKQVWRRQQSEARREEDDTAAAENGARSGTNGREDAWWEVEDDAD
GVGNGGGGGGFKGGEAGAQNRRRERDPGAGATELLGLAAGVGAGARFRVG
VRIVPIEALTVEDAARMSAEEYTRFYNLVVGERTGSG*
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