prot_H-canaliculatus_F_contig11663.1470.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11663.1470.1
Unique Nameprot_H-canaliculatus_F_contig11663.1470.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length217
Homology
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: D8LTB2_ECTSI (50S ribosomal protein L10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB2_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 6.980e-83
Identity = 141/190 (74.21%), Postives = 164/190 (86.32%), Query Frame = 0
Query:    1 MAVIDTTRPPKISTRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGE--GWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGRSIXXXXXXXXXXXXLAFAAE 188
            MAVIDTT+PPK++ RP K+KV+EEV  LLE S++VFS+PSS I+ NQVVALRK LP+GCTAKVVKNKLMRIA  G+ F +LA+VTTGENFW+F+EGEDNLAEPIKY+AEF+K  D +  GWG  PFKSGVF G ++DGPGVVAISKLPTK+ELMQRLAI + +VPTKLGRS XXXXXXXXXXX LAFA E
Sbjct:   43 MAVIDTTKPPKLTKRPAKLKVIEEVKSLLESSSMVFSVPSSYISANQVVALRKDLPEGCTAKVVKNKLMRIASDGSEFAQLADVTTGENFWIFIEGEDNLAEPIKYVAEFAKQFDKDTPGWGGSPFKSGVFGGDVLDGPGVVAISKLPTKKELMQRLAIAVNSVPTKLGRSXXXXXXXXXXXXKLAFAPE 232          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A835YRM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.290e-31
Identity = 71/156 (45.51%), Postives = 100/156 (64.10%), Query Frame = 0
Query:   13 STRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEE--LAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKL 166
            STR GK+  +  V   L K+T++F++PSS++  N V  +RK LP G  A+VVKNKLMR+A +G    E  + ++T GEN W FVE  D+L+E I    +F K V+ +      F  GV +G  +D  GV AIS LP+K EL +R+A+G+KAVPTK+
Sbjct:   48 STRAGKLATIASVKEDLAKATMIFAIPSSQLKVNSVTDMRKKLPAGTKARVVKNKLMRLAVEGAPQWEAVVGDMTKGENMWFFVE--DDLSESITVAKDFIKVVNKKDTHAPKF--GVLEGKALDAAGVEAISNLPSKTELYRRIAVGVKAVPTKI 199          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A7S4J3C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3C3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.150e-27
Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 0
Query:   13 STRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGRSI 170
            +T  GK   VE + GLL+ S ++F++P+  ++ +    LRK LP+G    VVKNKLM  A +GT +E  +E+ +G N W F+E  +++   IK   +F+K  D +     P   G  +G   D  GV AI KLP+K EL+ ++A GIKAVPTKL R +
Sbjct:   45 TTLEGKRVKVERIKGLLDTSEMIFTVPAGSMSVSDTQDLRKSLPEGTVMSVVKNKLMARALEGTDYESASEMLSGPNMWFFIE--EDIGATIKAYNKFTKDYDKKE--SHPILGGAMEGVNYDAAGVDAIGKLPSKTELIAKIAGGIKAVPTKLARVV 198          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A0G4GLP8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLP8_VITBC)

HSP 1 Score: 111 bits (277), Expect = 6.600e-26
Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = 0
Query:   13 STRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGED--NLAEPIKYIAEFSKGVDGEGWGKMP-------FKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGRSI 170
            +T+ GK   +++ + LL  + L+F+L  S++  N+ V LR+ LP+G     VKN+L+R+A KGT FE+ A   TG++ ++FV  ED   + E +K   +F KG        MP        K G FD +++D  GV AISKLPTK EL+Q++A+ I  VPT+L  S+
Sbjct:   86 TTKEGKQATIDKFSDLLGDTNLLFALEGSKLGPNERVKLRRSLPEGTKIHTVKNRLLRVAAKGTDFEDYANGATGQSLYVFVTHEDYKGVMEALK---QFGKG--------MPDFREHNVIKGGSFDSTVLDAEGVDAISKLPTKLELIQKIAVLINMVPTRLATSV 241          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A6V2PHN8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PHN8_9STRA)

HSP 1 Score: 106 bits (264), Expect = 8.030e-25
Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   12 ISTRP-GKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGRSI 170
            ++T P GK   V  V  LL+KS +VFS+P+  IT  Q   LR+ LP+G T  VVKN LM+ A +GT ++   E+  G N W FVE  +++   IK    F+K  +G+    M    GV +G + D  GV AISKLP+K EL+ ++A  I AVPTK+ R +
Sbjct:   39 MATSPAGKQAKVAAVKELLDKSEMVFSVPAGSITVAQTQLLRRALPEGTTMSVVKNTLMQRAIEGTDYQVAGELLKGPNMWFFVE--EDIGGSIKAFNAFTK-ENGKTESHMVL-GGVIEGVVYDSAGVTAISKLPSKLELIAQIAGAINAVPTKVARVV 194          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: K0STH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC)

HSP 1 Score: 106 bits (264), Expect = 8.890e-24
Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   13 STRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGRSI 170
            +T  GK   V  V  LL+ S +VF++P+S IT  QV  LR+ LP+G TAKVVKNKLM  A +GT +E + E+  G N W F+E  +++   +K   +F K  D           G  +G+  D  GV  ISKLP+K EL+ ++A  I+AVPTK+ R +
Sbjct:  163 TTLEGKKNTVSAVKELLDSSEMVFTVPASGITVAQVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVNEMLKGANMWFFIE--EDIGGSVKSWKKFVK--DEALAESHSILGGNIEGTNYDTAGVEQISKLPSKIELITQIASRIQAVPTKVARVV 316          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A5J4Z5L2_PORPP (50S ribosomal protein L10 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5L2_PORPP)

HSP 1 Score: 103 bits (257), Expect = 8.900e-24
Identity = 62/158 (39.24%), Postives = 89/158 (56.33%), Query Frame = 0
Query:   18 KVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEEL---AEVTTGENFWMFVEGED--NLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGRSI 170
            K K+V EV+  +++ST+V SLP   +T  QV  L+  +P+G T + VKN +++ A   T +  L   +E+T G N W+F+  E      E I    + SK  D           GVF G   D  G+VA+SKLPTKQEL Q++A+GI  V TK+ R+I
Sbjct:   43 KSKLVSEVSATMQQSTMVLSLPLEGLTVKQVNELKAAVPEGVTVRCVKNTIVKRAVADTEYSVLESGSELTKGHNLWVFIPEESVRGTVEGITGFLKTSKKAD-----TNAINGGVFGGEAYDADGIVALSKLPTKQELYQQIAVGINQVNTKVARAI 195          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A7S1E238_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E238_9STRA)

HSP 1 Score: 100 bits (250), Expect = 9.160e-23
Identity = 64/156 (41.03%), Postives = 89/156 (57.05%), Query Frame = 0
Query:   11 KISTRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVD-GEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTK 165
            + ST  GK + V ++  L++ S +VF++P+  IT +Q   LR+ LP+G TA VVKN LM  A  GT +E  AE+  G + W F+E  D++   IK    F K  D  E  G +    GV + +L D  GV  I  LP+K EL  ++A  IKAVPTK
Sbjct:   39 RASTLEGKKEKVAQIQSLIDTSQMVFTVPAGSITVSQSEILRRSLPEGTTAAVVKNTLMERAVSGTDYETAAELLKGPHMWFFIE--DDIGASIKAYNGFIKENDLMESHGII---GGVIESTLYDADGVKQIGNLPSKLELYAKIAGSIKAVPTK 189          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: A0A7S2ZLQ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLQ0_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 8.540e-22
Identity = 58/145 (40.00%), Postives = 86/145 (59.31%), Query Frame = 0
Query:   24 EVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKLGR 168
            +V   L+KSTL F+LP    T  +V  LR  +P+   A  VKN L RIA   + ++   ++T G N W+F E E ++   ++ I +F+K    E    +    GV + +L DG GV A+SKLP+KQ+L Q++AI I +VPTK+GR
Sbjct:   90 QVREQLDKSTLAFALPLEGYTVKEVSELRNVIPENSCALAVKNTLFRIAIADSTWDVAGDLTKGSNLWIFTE-EADMKGTVEAIKKFNKEKKKEETNGI--SGGVMENTLYDGKGVEALSKLPSKQDLYQKIAIAINSVPTKVGR 231          
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Match: B8BYW1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYW1_THAPS)

HSP 1 Score: 98.2 bits (243), Expect = 1.010e-21
Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 0
Query:   13 STRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVALRKGLPDGCTAKVVKNKLMRIACKGTAFEELAE-VTTGENFWMFVEGEDNLAEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQELMQRLAIGIKAVPTKL 166
            +T  GK   V  V  LL+ S +VF++P+S IT ++V  LR+ LP+G T KVVKNKLM  A +GT +  + +   TG N W F+E  +++   +K   +F K    +    +    G  +G   D  GV AISKLP+K EL+ ++A  +KAVPTK+
Sbjct:   40 TTLDGKKATVTHVKELLDSSEMVFTVPASGITVSKVQGLRRNLPEGTTVKVVKNKLMARAIEGTEYAPIGDQFLTGANMWFFIE--EDIGGTVKTWNQFVKEAGLKDTHSI--LGGNIEGVNYDTKGVDAISKLPSKMELIAQIAGAVKAVPTKV 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11663.1470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTB2_ECTSI6.980e-8374.2150S ribosomal protein L10 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YRM7_9STRA6.290e-3145.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4J3C3_9STRA1.150e-2740.51Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A0G4GLP8_VITBC6.600e-2639.52Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A6V2PHN8_9STRA8.030e-2542.50Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
K0STH8_THAOC8.890e-2441.77Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A5J4Z5L2_PORPP8.900e-2439.2450S ribosomal protein L10 n=1 Tax=Porphyridium pur... [more]
A0A7S1E238_9STRA9.160e-2341.03Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2ZLQ0_9RHOD8.540e-2240.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
B8BYW1_THAPS1.010e-2140.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 14..112
e-value: 1.9E-16
score: 60.0
IPR001790Ribosomal protein L10PPANTHERPTHR11560FAMILY NOT NAMEDcoord: 8..182
NoneNo IPR availableGENE3D3.30.70.1730coord: 12..145
e-value: 2.1E-27
score: 97.9
NoneNo IPR availablePANTHERPTHR11560:SF839S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 8..182
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 14..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11663contigH-canaliculatus_F_contig11663:2260..3966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11663.1470.1mRNA_H-canaliculatus_F_contig11663.1470.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11663 1425..3973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11663.1470.1 ID=prot_H-canaliculatus_F_contig11663.1470.1|Name=mRNA_H-canaliculatus_F_contig11663.1470.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=217bp
MAVIDTTRPPKISTRPGKVKVVEEVAGLLEKSTLVFSLPSSRITGNQVVA
LRKGLPDGCTAKVVKNKLMRIACKGTAFEELAEVTTGENFWMFVEGEDNL
AEPIKYIAEFSKGVDGEGWGKMPFKSGVFDGSLVDGPGVVAISKLPTKQE
LMQRLAIGIKAVPTKLGRSINLVPTKLGRAVKLAFAAEGADGEAAEGAEA
PEAAAAAPAEDAPAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P