prot_H-canaliculatus_F_contig1165.1453.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1165.1453.1
Unique Nameprot_H-canaliculatus_F_contig1165.1453.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length95
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1165.1453.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.450e-30
Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 0 
Query:    2 DPRQWFMAKTKVMAMIALDKHKVYTSSPEQSIGKGIEYKSYLAMVQTPIWLQKIQHLVGDIKVDCRYRTADDFLKDVRRLCANSFLYSRSTSN 94
            DPR+W+ A+T+V  MI LD  KVYT+SP+ SIG G  Y SYLAMV+TPIWL++IQ  V  +K  C+YRT D+FL DVRRLCANSF+++R TSN
Sbjct:  743 DPREWYCARTQVEKMIRLDYQKVYTNSPKLSIG-GASYTSYLAMVETPIWLREIQTRVAPVKPKCKYRTIDEFLHDVRRLCANSFMWTRETSN 834
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BLAST of mRNA_H-canaliculatus_F_contig1165.1453.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 6.210e-30
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 
Query:    2 DPRQWFMAKTKVMAMIALDKHKVYTSSPEQSIGKGIEYKSYLAMVQTPIWLQKIQHLVGDIKVDCRYRTADDFLKDVRRLCANSFLYSRSTSN 94
            DPR+W+ A+T+V  MI LD  KVYT+SP+ SIG G  Y SYLAMV+TPIWL++IQ  V  +K  C+YRT D+F+ DVRRLCANSF+++R TSN
Sbjct:  338 DPREWYCARTQVEKMIRLDYQKVYTNSPKLSIG-GASYTSYLAMVETPIWLREIQTRVAPVKPKCKYRTIDEFVHDVRRLCANSFMWTRETSN 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1165.1453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNI2_9PHAE2.450e-3062.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI3_ECTSI6.210e-3061.29Global transcription factor group n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 35..93
e-value: 3.5E-7
score: 30.2
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 38..95
score: 9.035
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 6..95
e-value: 3.3E-9
score: 38.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 38..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1165contigH-canaliculatus_F_contig1165:3301..4052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1165.1453.1mRNA_H-canaliculatus_F_contig1165.1453.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1165 3301..4061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1165.1453.1 ID=prot_H-canaliculatus_F_contig1165.1453.1|Name=mRNA_H-canaliculatus_F_contig1165.1453.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=95bp
MDPRQWFMAKTKVMAMIALDKHKVYTSSPEQSIGKGIEYKSYLAMVQTPI
WLQKIQHLVGDIKVDCRYRTADDFLKDVRRLCANSFLYSRSTSNE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain