prot_H-canaliculatus_F_contig1149.1315.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1149.1315.1
Unique Nameprot_H-canaliculatus_F_contig1149.1315.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length157
Homology
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: D8LDH4_ECTSI (HIG1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDH4_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 4.230e-36
Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0
Query:   78 GIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLYMAGPPEMHRETVEGKMAAISKQTNKWA---PPTAQAEAAAIEGNQK 156
            GIYSFKQGNK LSQKLMRGRVVAQGFTILVMTAG YMAGPPEM R+TVEGKM AISKQTN+W+   PPTAQAEA AIE  +K
Sbjct:   39 GIYSFKQGNKQLSQKLMRGRVVAQGFTILVMTAGFYMAGPPEMTRQTVEGKMEAISKQTNRWSGVPPPTAQAEAVAIEDGRK 120          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: A0A7S2W6B4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6B4_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.560e-6
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0
Query:   78 GIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLYMAGPPEMHRETVEGKMAAI 132
            G+Y+   GNK LSQ+ MR RVVAQG T+L++  G  M G     R+T E K  A+
Sbjct:   62 GLYTMLTGNKGLSQRFMRARVVAQGATVLILCTGTVMMGNQVRQRQTFEDKFLAM 116          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: A0A4D9D8E5_9STRA (HIG1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8E5_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.970e-5
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0
Query:   78 GIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLY 113
            G+Y+FK G K LSQ++MR RV+AQGFTI+V+ AG +
Sbjct:   33 GLYAFKSGEKHLSQRMMRARVLAQGFTIVVLMAGSF 68          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: T1G126_HELRO (HIG1 domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G126_HELRO)

HSP 1 Score: 50.1 bits (118), Expect = 3.760e-5
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   76 TPGIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLYM 114
            T G+YS K+G+  LSQ++MR RV+AQGFT+L +  G+YM
Sbjct:   55 TIGLYSLKKGDSKLSQRMMRMRVMAQGFTVLAVMGGVYM 93          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: UPI0010F65B4B (HIG1 domain family member 2A, mitochondrial n=2 Tax=Osmia TaxID=124287 RepID=UPI0010F65B4B)

HSP 1 Score: 49.7 bits (117), Expect = 5.620e-5
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 0
Query:   69 VCTSCRQTPGIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAG 111
            V T+   T G++SF QGNK++SQ +MR RV AQ FTIL M  G
Sbjct:   49 VATTAALTYGLFSFYQGNKIMSQYMMRARVAAQSFTILSMALG 91          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: T1ICY2_RHOPR (HIG1 domain-containing protein (Fragment) n=2 Tax=Rhodnius TaxID=13248 RepID=T1ICY2_RHOPR)

HSP 1 Score: 49.7 bits (117), Expect = 7.200e-5
Identity = 20/38 (52.63%), Postives = 30/38 (78.95%), Query Frame = 0
Query:   78 GIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLYMA 115
            G+YSF++G + +SQ +MR R+VAQGFT+L +  G+ MA
Sbjct:   66 GLYSFRKGERRMSQMMMRARIVAQGFTVLALVGGITMA 103          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: A0A200PZU7_9MAGN (Hypoxia induced protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PZU7_9MAGN)

HSP 1 Score: 48.9 bits (115), Expect = 7.730e-5
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query:   76 TPGIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLYMAG 116
            T G+ SFK+GN VL QKLMR RVV QG T+ +M    Y  G
Sbjct:   35 TAGLISFKRGNSVLGQKLMRARVVVQGATVALMVGSAYYYG 75          
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Match: UPI001CF72D84 (HIG1 domain family member 2A, mitochondrial n=1 Tax=Tribolium madens TaxID=41895 RepID=UPI001CF72D84)

HSP 1 Score: 49.3 bits (116), Expect = 8.190e-5
Identity = 21/44 (47.73%), Postives = 33/44 (75.00%), Query Frame = 0
Query:   71 TSCRQTPGIYSFKQGNKVLSQKLMRGRVVAQGFTILVMTAGLYM 114
            T+C    G++SF+ GN+ +SQ +MR R+VAQGFT++ + AG+ M
Sbjct:   50 TTCALCYGLWSFRTGNRKMSQYMMRTRIVAQGFTVVALIAGIGM 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1149.1315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LDH4_ECTSI4.230e-3682.93HIG1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2W6B4_9STRA6.560e-647.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D8E5_9STRA1.970e-561.11HIG1 domain-containing protein n=1 Tax=Nannochloro... [more]
T1G126_HELRO3.760e-556.41HIG1 domain-containing protein n=1 Tax=Helobdella ... [more]
UPI0010F65B4B5.620e-555.81HIG1 domain family member 2A, mitochondrial n=2 Ta... [more]
T1ICY2_RHOPR7.200e-552.63HIG1 domain-containing protein (Fragment) n=2 Tax=... [more]
A0A200PZU7_9MAGN7.730e-556.10Hypoxia induced protein n=1 Tax=Macleaya cordata T... [more]
UPI001CF72D848.190e-547.73HIG1 domain family member 2A, mitochondrial n=1 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007667Hypoxia induced protein, domainPFAMPF04588HIG_1_Ncoord: 78..111
e-value: 2.6E-12
score: 46.8
IPR007667Hypoxia induced protein, domainPROSITEPS51503HIG1coord: 15..126
score: 11.517
NoneNo IPR availablePANTHERPTHR12297HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATEDcoord: 75..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1149contigH-canaliculatus_F_contig1149:2332..4017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1149.1315.1mRNA_H-canaliculatus_F_contig1149.1315.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1149 870..4302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1149.1315.1 ID=prot_H-canaliculatus_F_contig1149.1315.1|Name=mRNA_H-canaliculatus_F_contig1149.1315.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp
MCIPSCWSRPCLDPHLFSPNVSEEHMSLDGWLDCHTPWAMKRYIHPCLVR
RAQVTCLFRMCEDQSLCFVCTSCRQTPGIYSFKQGNKVLSQKLMRGRVVA
QGFTILVMTAGLYMAGPPEMHRETVEGKMAAISKQTNKWAPPTAQAEAAA
IEGNQK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007667Hypoxia_induced_domain