prot_H-canaliculatus_F_contig11415.1251.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11415.1251.1
Unique Nameprot_H-canaliculatus_F_contig11415.1251.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length358
Homology
BLAST of mRNA_H-canaliculatus_F_contig11415.1251.1 vs. uniprot
Match: A0A6H5L2A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A9_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 8.910e-115
Identity = 251/369 (68.02%), Postives = 274/369 (74.25%), Query Frame = 0
Query:    1 MIPRRKELIVGALTLLSCSCPTLAFLPSTPHTGAPAARAAATGARDRQATVSVTERSARSHPRRCRVRTRVAA-----------RGDEQEEGSATFRPAATATRRSRLSGSDRRSKVRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPLTLDMALQEGVNRALRGDAGVLRQVLAPGVEWRGPLGNNAGLLKVEGELRGLGSLLTDPRMAVFESKDGGRRLEWIASGTWPLPWLPRFIVKGASEVETGADGKVVKITDTWEGNPISLALEHLVPGFWDIWHQLGSPPAEKAPSRVVKRTLGYAIREYAPRLVTQPSLIDYSNSREVRGA 358
            M+PRR+     ALTL+SCSCPTLAFLPSTPHT A         AR      +  ++ ARS PR+C+ RTR  A           RGD +E      R   T  R +  +G                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPLTLD AL+EGVNRA+RGD GVLRQVLAPGVEWRGPLGNNAGL KVE ELRGLGSLL+ PRM+VF SKDG +RLEWIASGTWPLPWLPRFIVKGAS+++TG DGKVVKITDTWEGNP++L L+HLVPGFWDIWHQLGSPPAEK P RVVKR LGY IREYAPRL TQPSLIDYSNSRE+R A
Sbjct:    1 MVPRRRRAFTAALTLVSCSCPTLAFLPSTPHTAAXXXXXX--XARRAGNIATAADQVARSEPRQCQSRTRALAXXXXXXXXXXXRGDLEEGKRYNDR---TGRRSTATTGXX------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPLTLDKALEEGVNRAMRGDPGVLRQVLAPGVEWRGPLGNNAGLAKVEEELRGLGSLLSAPRMSVFASKDGAKRLEWIASGTWPLPWLPRFIVKGASKLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRLATQPSLIDYSNSREIRKA 340          
BLAST of mRNA_H-canaliculatus_F_contig11415.1251.1 vs. uniprot
Match: D7FR29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR29_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 8.030e-96
Identity = 139/167 (83.23%), Postives = 151/167 (90.42%), Query Frame = 0
Query:  192 LRGDAGVLRQVLAPGVEWRGPLGNNAGLLKVEGELRGLGSLLTDPRMAVFESKDGGRRLEWIASGTWPLPWLPRFIVKGASEVETGADGKVVKITDTWEGNPISLALEHLVPGFWDIWHQLGSPPAEKAPSRVVKRTLGYAIREYAPRLVTQPSLIDYSNSREVRGA 358
            +RGD GVLRQVLAPGVEWRGPLGNNAGL KVE ELRGLGSLL  PR++VF SKDG +RLEW+ASGTWPLPWLPRFIVKGAS ++TG DGKVVKITDTWEGNP++L L+HLVPGFWDIWHQLGSPPAEK P RVVKR LGY IREYAPR+ TQPSLIDYSNSRE+R A
Sbjct:    1 MRGDPGVLRQVLAPGVEWRGPLGNNAGLAKVEEELRGLGSLLNAPRLSVFASKDGAKRLEWVASGTWPLPWLPRFIVKGASTLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRMATQPSLIDYSNSREIRKA 167          
BLAST of mRNA_H-canaliculatus_F_contig11415.1251.1 vs. uniprot
Match: A0A835YSS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS2_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.760e-51
Identity = 88/188 (46.81%), Postives = 125/188 (66.49%), Query Frame = 0
Query:  175 ELPLTLDMALQEGVNRALRGDAGVLRQVLAPGVEWRGPLGNNAGLLKVEGELRGLGSLLTDPRMAVFESK---DGGRRLEWIASGTWPLPWLPRFIVKGASEVET-GADGKVVKITDTWEGNPISLALEHLVPGFWDIWHQLGSPPAEKAPSRVVKRTLGYAIREYAPRLVTQPSLIDYSNSREVRGA 358
            E PL L  AL  G+NRA+RGD+ VLRQVL+    W+GP+ +     K+E +LR +GS L+DPR  V  +    D    LEW+AS TWPLPW PR +++G + V    A G+++ + DTWE  P+   + HL+PGFWDIW+Q  SP AE+ P +V++R  GY + ++APRLV +P+L+D +NSR+ R A
Sbjct:   21 ETPLELGPALTLGLNRAIRGDSSVLRQVLSDNCSWKGPVASYDSRNKIEEDLRNVGSFLSDPRFTVASTTPTGDATYSLEWLASATWPLPWTPRIVIQGRTLVRLDSAGGRIISMEDTWEEAPVQALIRHLLPGFWDIWNQFCSPIAERYPHKVLRRGRGYEVWQFAPRLVLRPTLVDRTNSRQARMA 208          
BLAST of mRNA_H-canaliculatus_F_contig11415.1251.1 vs. uniprot
Match: A0A8J5XYQ7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYQ7_DIALT)

HSP 1 Score: 88.6 bits (218), Expect = 8.340e-16
Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 0
Query:  230 GSLLTDPRMAVFESKDGGR---RLEWIASGTWPLPWLPRFIVKGAS--EVETGADGKV--VKITDTWEGNPISLALEHLVPGFWDIWHQLGSPPAEKAPSRVVKRTLGYAIREYAPRLVTQPSL 346
            G  L DP + V      G    R+EW+ASGTWPLPW PR +  G+S  E+ET   G V  V++TDT + +P+ + +  L+P + D++    SPPAE  P RVV+    Y +R   P +  + +L
Sbjct:  106 GKFLVDPMLEVLSVSVTGASSARVEWLASGTWPLPWRPRALALGSSALELETLPTGAVHVVRVTDTLQTSPVDVLVSQLLPNWEDVYSLYNSPPAELRPYRVVRAARTYELRWMPPGIALRCAL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11415.1251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L2A9_9PHAE8.910e-11568.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR29_ECTSI8.030e-9683.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSS2_9STRA1.760e-5146.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J5XYQ7_DIALT8.340e-1638.71Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..358
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11415contigH-canaliculatus_F_contig11415:1663..4048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11415.1251.1mRNA_H-canaliculatus_F_contig11415.1251.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11415 1663..4048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11415.1251.1 ID=prot_H-canaliculatus_F_contig11415.1251.1|Name=mRNA_H-canaliculatus_F_contig11415.1251.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=358bp
MIPRRKELIVGALTLLSCSCPTLAFLPSTPHTGAPAARAAATGARDRQAT
VSVTERSARSHPRRCRVRTRVAARGDEQEEGSATFRPAATATRRSRLSGS
DRRSKVRMMMAAAAPAAGGGAEEGVMGSTASAAAAAANTPVAASGGGVTT
PVAAPSETINNNRNSNDDDDDDDDELPLTLDMALQEGVNRALRGDAGVLR
QVLAPGVEWRGPLGNNAGLLKVEGELRGLGSLLTDPRMAVFESKDGGRRL
EWIASGTWPLPWLPRFIVKGASEVETGADGKVVKITDTWEGNPISLALEH
LVPGFWDIWHQLGSPPAEKAPSRVVKRTLGYAIREYAPRLVTQPSLIDYS
NSREVRGA
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