prot_H-canaliculatus_F_contig11412.1249.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11412.1249.1
Unique Nameprot_H-canaliculatus_F_contig11412.1249.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length507
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11412.1249.1 vs. uniprot
Match: D7FXJ8_ECTSI (Pinin_SDK_memA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ8_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 4.850e-75
Identity = 298/523 (56.98%), Postives = 313/523 (59.85%), Query Frame = 0 
Query:    4 RPRDNNTSNGGREAPLQKSYQVSREKQRAMSGTWERGLDPATAALEDDAPPPQSEGRGRLGXXXXXXXXSRGDANNSMAAYQRAADGTGSRH----DVAVRRANGASGGGVRGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKVGSRGDFSRFGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRPR-------------VTSTIVVAGEEDGGDGSGTAENGELDRWNAE--PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXVDGAXXXXXSDKEKTTEGVQAMDEEAVEEGEEGGGNARRPTGKIVVVSGGGPRGRAARVGGVAGSGGLRGSLASRLGPPMGRPVMVKGGEGGDDGGGEGGFVPLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRARKQLDHDQTLIERQKSVAEMAAIRQAQEKRXXXXXXXXXXXXXXXXXXXXXXXXNARQQKTLVALHGNAFTANQEQLKGFIFTK 507
            RPRD  TSNGGRE    +  Q SR+K RAMSGTWERGLDPATAAL+DDAPP   EGRGR G         RG    S+A YQR AD  G R     D  V   +GA   GVRGDR                                 D+ G R  FSR     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  VTSTIVVAG+ED  +G GT ENGELDRWN E  PA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX    XXXXX                                        GGPRGRAA +GGVAGSGG RGSLASRLGP                      F+PLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRAR+QLDHD+++I+RQKSV EMAAIRQAQEKR                         ARQQKTLVALHGN F ANQEQLKGFIFTK
Sbjct:   72 RPRD--TSNGGREEAPHRPSQASRDKYRAMSGTWERGLDPATAALDDDAPP---EGRGRGGGGTAGL---RGGTKGSIAHYQRPADSHGDRRGRGRDRGVAPMHGA---GVRGDRDGMRG----------------------------DRTGDRDVFSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSTIVVAGDEDT-NGDGTTENGELDRWNTELPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXGGPRGRAANIGGVAGSGGGRGSLASRLGPXXXXXXXXX--XXXXXXXXXXXFMPLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQMAETAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTK 539
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11412.1249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXJ8_ECTSI4.850e-7556.98Pinin_SDK_memA domain-containing protein n=2 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006786Pinin/SDK/MemA proteinPFAMPF04696Pinin_SDK_memAcoord: 404..507
e-value: 1.1E-11
score: 44.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11412contigH-canaliculatus_F_contig11412:663..3699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11412.1249.1mRNA_H-canaliculatus_F_contig11412.1249.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11412 663..3699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11412.1249.1 ID=prot_H-canaliculatus_F_contig11412.1249.1|Name=mRNA_H-canaliculatus_F_contig11412.1249.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=507bp
DTGRPRDNNTSNGGREAPLQKSYQVSREKQRAMSGTWERGLDPATAALED
DAPPPQSEGRGRLGGGGGGGGGSRGDANNSMAAYQRAADGTGSRHDVAVR
RANGASGGGVRGDRGGVRGERGDVTGDRGTARGERGAIRGNANGTRVDKV
GSRGDFSRFGNGGGSGRGGGGTRDHDYRASGGGGGRGVGEPDAKRPRVTS
TIVVAGEEDGGDGSGTAENGELDRWNAEPAPTSTVSATSAAAEAPSPGET
KGDDDNENDDDDDDNVDYEPEPEPEAGGGVDGAAAAAGSDKEKTTEGVQA
MDEEAVEEGEEGGGNARRPTGKIVVVSGGGPRGRAARVGGVAGSGGLRGS
LASRLGPPMGRPVMVKGGEGGDDGGGEGGFVPLSERPMPEPSKPELHVAY
KDGDTKKRNRRMFGGLMAHLGRARKQLDHDQTLIERQKSVAEMAAIRQAQ
EKRQHRLAAVSAAREERDEELHKRDYINARQQKTLVALHGNAFTANQEQL
KGFIFTK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006786Pinin_SDK_MemA