prot_H-canaliculatus_F_contig11313.1188.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11313.1188.1
Unique Nameprot_H-canaliculatus_F_contig11313.1188.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length37
Homology
BLAST of mRNA_H-canaliculatus_F_contig11313.1188.1 vs. uniprot
Match: D7FSV8_ECTSI (Sister chromatid cohesion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV8_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 5.270e-11
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    4 RYAPFRALLIEDVFGLLLKMPTGRRQLRTFRIAH 37
            +Y  FR LLIEDVFGLLLKMPTGRRQLRTFRIAH
Sbjct:  701 KYVSFRPLLIEDVFGLLLKMPTGRRQLRTFRIAH 734          
BLAST of mRNA_H-canaliculatus_F_contig11313.1188.1 vs. uniprot
Match: A0A6H5JLU6_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLU6_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 5.290e-11
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    4 RYAPFRALLIEDVFGLLLKMPTGRRQLRTFRIAH 37
            +Y  FR LLIEDVFGLLLKMPTGRRQLRTFRIAH
Sbjct:  784 KYVSFRPLLIEDVFGLLLKMPTGRRQLRTFRIAH 817          
BLAST of mRNA_H-canaliculatus_F_contig11313.1188.1 vs. uniprot
Match: A0A835Z2V2_9STRA (Sister chromatid cohesion protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V2_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 7.700e-6
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    2 FARYAPFRALLIEDVFGLLLKMPTGRRQLRTFRIA 36
            F  + P R LL++D+FGLLLK+PT +RQLRTF++A
Sbjct:  345 FVWHEPHRKLLLDDIFGLLLKLPTTKRQLRTFKLA 379          
BLAST of mRNA_H-canaliculatus_F_contig11313.1188.1 vs. uniprot
Match: A0A024TYL2_9STRA (Sister chromatid cohesion protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYL2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.690e-5
Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    2 FARYAPFRALLIEDVFGLLLKMPTGRRQLRTFRIAH 37
            F  Y   RALLI+D+F +LLK+P+ +R LRTF+++H
Sbjct:  401 FLHYPTHRALLIDDIFSVLLKLPSNKRNLRTFKLSH 436          
BLAST of mRNA_H-canaliculatus_F_contig11313.1188.1 vs. uniprot
Match: A0A3R6Z4N6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z4N6_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.710e-5
Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    2 FARYAPFRALLIEDVFGLLLKMPTGRRQLRTFRIAH 37
            F  Y   RALLI+D+F +LLK+P+ +R LRTF+++H
Sbjct:  423 FLHYPTHRALLIDDIFSVLLKLPSNKRNLRTFKLSH 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11313.1188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FSV8_ECTSI5.270e-1188.24Sister chromatid cohesion protein n=1 Tax=Ectocarp... [more]
A0A6H5JLU6_9PHAE5.290e-1188.24PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835Z2V2_9STRA7.700e-660.00Sister chromatid cohesion protein n=1 Tax=Tribonem... [more]
A0A024TYL2_9STRA3.690e-552.78Sister chromatid cohesion protein n=3 Tax=Aphanomy... [more]
A0A3R6Z4N6_9STRA3.710e-552.78Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11313contigH-canaliculatus_F_contig11313:3786..3896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11313.1188.1mRNA_H-canaliculatus_F_contig11313.1188.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11313 3786..3896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11313.1188.1 ID=prot_H-canaliculatus_F_contig11313.1188.1|Name=mRNA_H-canaliculatus_F_contig11313.1188.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=37bp
FFARYAPFRALLIEDVFGLLLKMPTGRRQLRTFRIAH
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