prot_H-canaliculatus_F_contig11301.1177.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11301.1177.1
Unique Nameprot_H-canaliculatus_F_contig11301.1177.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length146
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11301.1177.1 vs. uniprot
Match: A0A6H5JHD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD9_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.500e-5
Identity = 44/122 (36.07%), Postives = 56/122 (45.90%), Query Frame = 0 
Query:   22 RHSSMTYTLEDLHASIVRAGARRAGMSNFGK---RMEP---VTRHGLESISPPPAGFPGLGPAPCKPRRRHSRRQAPSKKADGSAAVTASAXXXXXKTAAAVVVDSEWVWGQGSQKTLVVDV 137
            R + +T T +DL AS+VRAG RRAGM        + EP   V R G E    PPA     G      R  H+  +AP K     A+           T AA  V ++WVWGQG +K    +V
Sbjct:   33 RPAGITNTFQDLQASLVRAGMRRAGMPAAASACVKAEPTSSVGRSGSEYPYVPPAAVSTQG------RSSHAPSEAPRKSGRAGAS-----------TRAAAAVPAKWVWGQGQEKEXXXEV 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11301.1177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHD9_9PHAE2.500e-536.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11301contigH-canaliculatus_F_contig11301:1141..2056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11301.1177.1mRNA_H-canaliculatus_F_contig11301.1177.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11301 1141..2285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11301.1177.1 ID=prot_H-canaliculatus_F_contig11301.1177.1|Name=mRNA_H-canaliculatus_F_contig11301.1177.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=146bp
MAASFIQHHTQRPSVADITVPRHSSMTYTLEDLHASIVRAGARRAGMSNF
GKRMEPVTRHGLESISPPPAGFPGLGPAPCKPRRRHSRRQAPSKKADGSA
AVTASAVATASKTAAAVVVDSEWVWGQGSQKTLVVDVGSGQGMVEK
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