prot_H-canaliculatus_F_contig112.1077.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig112.1077.1
Unique Nameprot_H-canaliculatus_F_contig112.1077.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length225
Homology
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: D7FK25_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK25_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.600e-62
Identity = 96/178 (53.93%), Postives = 129/178 (72.47%), Query Frame = 0
Query:   48 GIISATNAIIMLNVAMFMVQEHDPSFTARFYKLAPAILE-GEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETIRHLMGPHPAVGSFIISSAETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRPR 224
            G+++ATNA++++N  +F+ Q+ DPS T  FYKLA AI + GEWY             H A NS++ F+ G+ TE  +GT +F+ LYVCSG++GNVLSCIV+P+ P+LGASGAIFGL GAE + HL GP  ++  F+ S  +TAFFA +V ++VPNIDH GHLGGFVGGA L LL++PR
Sbjct:   75 GVLTATNALLVINFLVFLQQQQDPSVTTSFYKLAYAITDHGEWYXXXXXXXXXXXXGHLAGNSMALFNIGRGTETYMGTEKFVALYVCSGVSGNVLSCIVDPLTPSLGASGAIFGLLGAEAMIHLAGPKASMPLFVSSVGQTAFFAVLVGLLVPNIDHWGHLGGFVGGAALTLLIQPR 252          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: A0A6H5L1Y9_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y9_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.100e-61
Identity = 98/178 (55.06%), Postives = 130/178 (73.03%), Query Frame = 0
Query:   48 GIISATNAIIMLNVAMFMVQEHDPSFTARFYKLAPAILE-GEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETIRHLMGPHPAVGSFIISSAETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRPR 224
            G+++ATNA++++N  +F+ Q+ DPS T  FY LA AI + GEWYRLV          H A NS++ F+ G+ TE  +GT +F+ LYVCSG++GNVLSCIV+P+  +LGASGAIFGL GAE + HL GP  ++  F+ S  +TAFFA +V +VVPNIDH GHLGGFVGGA L LL++PR
Sbjct:  177 GVLTATNALLVINFLVFLQQQQDPSVTTSFYNLAYAITDHGEWYRLVXXXXXXXXXVHLASNSMALFNIGRGTETYMGTEKFVALYVCSGVSGNVLSCIVDPLSASLGASGAIFGLLGAEAMIHLAGPKASMPLFVSSVGQTAFFAVLVGLVVPNIDHWGHLGGFVGGAALTLLIQPR 354          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: D7FK43_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK43_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.560e-46
Identity = 88/191 (46.07%), Postives = 120/191 (62.83%), Query Frame = 0
Query:   43 GSKKKGIISATNAIIMLNVAMFMVQEHDPSFTARFYKLAPAILE-GEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGA--------ETIRHLMGPHPAVGSFIISSAETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRPR 224
            GS  +G I+ATN ++ LN  +++ Q   P+ T   +K+APAI + G+WYRL+TPI LHGS++H AVNS+SF S G   E  +G  +F+ +Y  +GIAGNVLSCIVNP  P++GASGAIFG+ GA        ET+        A+ +     A+T     V  M    ID+MGHLGGF+GGA +  L+ PR
Sbjct:   50 GSGGQGGITATNVLLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNV----AQTVMINVVYGMGSSQIDNMGHLGGFLGGAAMTFLIGPR 236          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: A0A6H5JA75_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA75_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.920e-45
Identity = 89/191 (46.60%), Postives = 121/191 (63.35%), Query Frame = 0
Query:   43 GSKKKGIISATNAIIMLNVAMFMVQEHDPSFTARFYKLAPAILE-GEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGA--------ETIRHLMGPHPAVGSFIISSAETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRPR 224
            GS  +G I+ATNA++ LN  +++ Q   P+ T   +K+APAI + G+WYRL+TPI LHGS++H AVNS+SF S G   E  +G  +F+ +Y  +GIAGNVLSCIVNP  P++GASGAIFG+ GA        ET+        A+ +     A+T     V  M    ID+MGHLGGF+GGA +  L+ PR
Sbjct:  212 GSGGQGGITATNALLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTVAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNV----AQTVMINVVYGMGSSQIDNMGHLGGFLGGAAITFLIGPR 398          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: R7Q8K5_CHOCR (Rhomboid domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8K5_CHOCR)

HSP 1 Score: 124 bits (311), Expect = 3.030e-30
Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 0
Query:   50 ISATNAIIMLNVAMFMVQE-HDPSFTARFYKLAPAILEGEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETI-----RHLMGPHPAVGSFIISSAETAFFAFVVAMVVPN-IDHMGHLGGFVGGAVLMLLLRPR 224
            I  ++ ++ LNV +F +Q    P+   R  K+  AI  G++YRL +P+ LH S SH  VNS S  S G   E+  G  RFL LY+ SG++GNVLS   +P  PA+GASGAIFGL GA  +     R ++GP    G  + S A      F + +   + +D+ GHLGGF+GG     LL PR
Sbjct:  150 IRISHVLLALNVGVFALQTLMGPNVLMRGAKVNSAITAGQYYRLFSPMFLHASVSHLLVNSFSLHSTGPSVESWFGKPRFLSLYIASGVSGNVLSYFCSP-TPAVGASGAIFGLVGASLVVLGRHRQILGPRARKG--LRSLAYVVIMNFGIGLTPGSRVDNFGHLGGFLGGIAFSYLLGPR 328          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: A0A8J9RUQ7_9CHLO (RHOMBOID-like protein 10, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RUQ7_9CHLO)

HSP 1 Score: 114 bits (285), Expect = 5.670e-27
Identity = 69/178 (38.76%), Postives = 93/178 (52.25%), Query Frame = 0
Query:   53 TNAIIMLNVAMFMVQ-EHDPSFTARFYKLAPAILEGEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETI-----RHLMGPHPAVGSFIISS-AETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRP 223
            T+ +++LN A F+ Q            K    I  GEW+RL+TP+ALH SW H   N+ S  S G   E   G  RF+ +Y  S + G+V S  +NP  P++GASGAIFGL GA  +     R LMG     G  I+ S  ++      + +  P ID  GHLGG +GGA+   LL P
Sbjct:  103 TDFLLVLNAAAFIAQIVSKDRLLLLGAKDNQLIRAGEWWRLITPVALHASWLHLLTNNYSLNSLGPAVEGLCGRQRFVSVYTASALMGSVASYALNPS-PSVGASGAIFGLGGALAVYAARHRKLMGSR---GDAILQSLGQSLILNLAIGLTTPRIDQWGHLGGLIGGAMTAYLLGP 276          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: A0A6A7LMI4_9CHLR (Rhomboid family intramembrane serine protease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6A7LMI4_9CHLR)

HSP 1 Score: 111 bits (277), Expect = 3.260e-26
Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 0
Query:   26 PGGHKQTAGGDTVPKNNGSKKKGIISATNAIIMLNVAMFMVQEHDP-SFTARFY-----KLAPAILEGEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETIRHLMG--PHPA-----VGSFIISSAETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRPR 224
            P  H+     DT P      +    + T AI+ +NVA+++  E    S  +R       K+   I EGE++RL+ P+ LH    H   N++   S+G+  E   G  RFLV+Y+ SG+AG+VLS +++P  P+ GASGAIFG+AGA  + +      HPA     +G  I   A  A    V  +V P ID+ GH GG +GG    + L PR
Sbjct:    7 PQEHRAAGEVDTSPPATSRLRIPGTALTWAIVGINVAVWLSMEASGGSMNSRVIVDFGAKVNALIAEGEYWRLIMPVFLHIGVVHLVFNTVGLLSFGRLVETTYGHVRFLVIYLVSGVAGSVLSYLMSPS-PSAGASGAIFGIAGALAVFYAYNRRAHPASDQGQLGGIITVLAINA----VYGVVQPGIDNWGHAGGLIGGVAAAVWLVPR 213          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: A0A7S1H9N4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9N4_HEMAN)

HSP 1 Score: 108 bits (269), Expect = 8.840e-26
Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 0
Query:   53 TNAIIMLNVAMFMVQE-HDPSFTARFYKLAPAILEGEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETI---RH--LMGPHPAVGSFIISSAETAFFAFVVAMVV-PNIDHMGHLGGFVGGAV 216
            T A++ +NVA+F  Q     + T     ++  I  G++YRL TP+ LHGS++H  VN  S  + G + EA  G  R  V+Y+ SG+AGNVLSC+++  + ++GASGAIFGL GA  +   RH  ++G    V   + S  +T F    + +    NID+ GHLGG VGG V
Sbjct:   17 TKALLAVNVAVFFAQTLSQGALTLAGAMVSSDIAAGQYYRLFTPMFLHGSFNHLLVNCFSLNAVGPQVEALYGLDRMSVVYLASGVAGNVLSCMMSSHM-SVGASGAIFGLVGALGVFLARHQEMLGGGSKVA--LSSIGQTIFLNMALGLRPGSNIDNWGHLGGLVGGVV 184          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: A0A7C6PNH9_9FIRM (Rhomboid family intramembrane serine protease n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6PNH9_9FIRM)

HSP 1 Score: 108 bits (270), Expect = 1.620e-25
Identity = 65/174 (37.36%), Postives = 94/174 (54.02%), Query Frame = 0
Query:   51 SATNAIIMLNVAMFMVQEHDPSFTARF-YKLAPAILEGEWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGAETIRHLMGPHPAVGSFIISS-AETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLR 222
            SATN +I +N+A+F+          +F  K  PAI +G++YRLVT + LH    H   N  + +  G   E  LG  RF +LY+ SG+ GN+LS  + P+ P+LGASGAIFGL G      L  P P++   +++       + F+       ID+  HLGG +GG +L  L R
Sbjct:   16 SATNLLIAINLAVFITDFILGGVLTQFGLKFGPAIWQGQYYRLVTALFLHAGIFHLLFNLYALYYLGPALEIGLGRHRFWLLYLLSGVTGNLLSLRLAPLAPSLGASGAIFGLLGYYLYLSLALPRPSLRQGVVTIIVVNLLWGFLPG---SRIDNFAHLGGLLGGFLLGPLFR 186          
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Match: B8BT98_THAPS (Rhomboid domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT98_THAPS)

HSP 1 Score: 114 bits (284), Expect = 2.110e-25
Identity = 74/179 (41.34%), Postives = 98/179 (54.75%), Query Frame = 0
Query:   53 TNAIIMLNVAMFMVQEHDPSFTARFYKLAPAILEG-EWYRLVTPIALHGSWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMVPALGASGAIFGLAGA-----ETIRHLMG-PHPAVGSFIISSAETAFFAFVVAMVVPNIDHMGHLGGFVGGAVLMLLLRPR 224
            T  I +LN+A+F +Q   P+ T    K +  +LEG + +RL+TPI LHG   H   NS S  S G   E   G +RF+  Y+ SGI GNV+S I +P  PA+GASGAIFGL GA        + L G       S +I   ET  F  ++ M  P ID+ GH+GGF+GG     L  P+
Sbjct:  535 TGNIFLLNIAVFGMQTLYPALTGWGAKRSDLLLEGRQLHRLITPIFLHGGIGHLMANSYSLKSMGMNIERSFGRSRFVATYLLSGIMGNVVSAIQSPN-PAVGASGAIFGLVGAYYTFLSRNQDLFGYSGQRQKSALI---ETIGFNLLLGMTNPMIDNWGHIGGFIGGVGCAYLFGPK 709          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig112.1077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK25_ECTSI7.600e-6253.93Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L1Y9_9PHAE5.100e-6155.06Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
D7FK43_ECTSI2.560e-4646.07Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JA75_9PHAE2.920e-4546.60Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
R7Q8K5_CHOCR3.030e-3041.21Rhomboid domain-containing protein n=1 Tax=Chondru... [more]
A0A8J9RUQ7_9CHLO5.670e-2738.76RHOMBOID-like protein 10, chloroplastic n=1 Tax=Co... [more]
A0A6A7LMI4_9CHLR3.260e-2635.85Rhomboid family intramembrane serine protease n=1 ... [more]
A0A7S1H9N4_HEMAN8.840e-2640.35Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7C6PNH9_9FIRM1.620e-2537.36Rhomboid family intramembrane serine protease n=1 ... [more]
B8BT98_THAPS2.110e-2541.34Rhomboid domain-containing protein n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 45..224
e-value: 1.8E-35
score: 124.1
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 86..223
e-value: 1.2E-32
score: 113.0
NoneNo IPR availablePANTHERPTHR43731FAMILY NOT NAMEDcoord: 39..223
NoneNo IPR availablePANTHERPTHR43731:SF14RHOMBOID-LIKE PROTEIN 10, CHLOROPLASTICcoord: 39..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 200..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..224
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..221
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 48..223
NoneNo IPR availableTMHMMTMhelixcoord: 48..67
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 204..221
NoneNo IPR availableTMHMMTMhelixcoord: 128..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig112contigH-canaliculatus_F_contig112:3437..8144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig112.1077.1mRNA_H-canaliculatus_F_contig112.1077.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig112 1982..16559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig112.1077.1 ID=prot_H-canaliculatus_F_contig112.1077.1|Name=mRNA_H-canaliculatus_F_contig112.1077.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=225bp
MMAAKKHHIFSSQEEGRGTDRYPAAPGGHKQTAGGDTVPKNNGSKKKGII
SATNAIIMLNVAMFMVQEHDPSFTARFYKLAPAILEGEWYRLVTPIALHG
SWSHCAVNSLSFFSYGQKTEADLGTTRFLVLYVCSGIAGNVLSCIVNPMV
PALGASGAIFGLAGAETIRHLMGPHPAVGSFIISSAETAFFAFVVAMVVP
NIDHMGHLGGFVGGAVLMLLLRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf