prot_H-canaliculatus_F_contig110.924.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig110.924.1
Unique Nameprot_H-canaliculatus_F_contig110.924.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length452
Homology
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BLAST of mRNA_H-canaliculatus_F_contig110.924.1 vs. uniprot
Match: D8LPW4_ECTSI (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW4_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 1.350e-111
Identity = 225/391 (57.54%), Postives = 259/391 (66.24%), Query Frame = 0 
Query:    1 MGLRERFLTAGVAIPLALWAIFYDAKLCLSLILVLQAICVHELGQLLRRTRAARAIAATGVRVGIIGSPFLLHVIAETVALVTAFGNRDASAAAIVVGMALIVARRIAIMRDHWSASNLAAGKAASAPDFSSDRSSSCRQGELGSGPAAAMKTVTTAVHGPLPACFDAAKIGEDGGXXXXXXXXX-SGVVEAGVFLLALEISAMLWLVGGWSSLVALRFRGSRGAADVVFVFSVVFNSDNGGLLAGSVFKAFGRKWQ-SIGEPGLQDVRSPEGPKSTPAAAA----IGTGVSAPSLLNVASPNKTWVGVTGAIVLGTTTALVLEGVLGGLYPGPFW-QTHRGLPGEQ-KAVFFSLGDLPRAWLGLAGAAVCAVGVLGDLWESLLKRTAMVK 383
            MGLRERFLTA VA+PLALWAIF+DA LCLSL+LVLQA+CV E+G+LLRRTRAARAIAATGV V ++GS FL HVIAETV+L+TAF  RDA+  A+ VGMALIVARR+ +MRDHW AS L+A K                                               +G  GGXXXXXXXXX +GV+EAGVFLLALEISAMLW+V G SSLVALRFRGSRGAADVVF+ +VVFNSDNGGLLAGS++K   RK Q  +    L           TP AAA    +  G   P LL VASP KTWVGVTG+I LGT TAL LE  L  L   P   +    LPGE+ +   FS+G +    LG+ GA +C VGV+GDLWESLLKRTAMVK
Sbjct:    1 MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGVALLGSTFLFHVIAETVSLITAFCGRDAAGIAMCVGMALIVARRLVLMRDHWVASKLSAEK----------------------------------------------PVGVSGGXXXXXXXXXXAGVMEAGVFLLALEISAMLWMVCGCSSLVALRFRGSRGAADVVFLLAVVFNSDNGGLLAGSMYKVLRRKRQLHLSSSELLQRHQRSSASQTPPAAAGAAEMTPGQKHPGLLTVASPGKTWVGVTGSIALGTATALTLEQALLFLLHEPLLSRVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVK 345
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig110.924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPW4_ECTSI1.350e-11157.54Phosphatidate cytidylyltransferase n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01148CTP_transf_1coord: 290..383
e-value: 1.9E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR46382FAMILY NOT NAMEDcoord: 197..383
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 249..299
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 414..432
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 403..413
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 326..352
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 373..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 300..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 433..451
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 208..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..89
NoneNo IPR availableTMHMMTMhelixcoord: 354..376
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 300..322
NoneNo IPR availableTMHMMTMhelixcoord: 229..248
NoneNo IPR availableTMHMMTMhelixcoord: 90..109
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig110contigH-canaliculatus_F_contig110:22613..25983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig110.924.1mRNA_H-canaliculatus_F_contig110.924.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig110 22546..26926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig110.924.1 ID=prot_H-canaliculatus_F_contig110.924.1|Name=mRNA_H-canaliculatus_F_contig110.924.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=452bp
MGLRERFLTAGVAIPLALWAIFYDAKLCLSLILVLQAICVHELGQLLRRT
RAARAIAATGVRVGIIGSPFLLHVIAETVALVTAFGNRDASAAAIVVGMA
LIVARRIAIMRDHWSASNLAAGKAASAPDFSSDRSSSCRQGELGSGPAAA
MKTVTTAVHGPLPACFDAAKIGEDGGDGGSGGRGGSGVVEAGVFLLALEI
SAMLWLVGGWSSLVALRFRGSRGAADVVFVFSVVFNSDNGGLLAGSVFKA
FGRKWQSIGEPGLQDVRSPEGPKSTPAAAAIGTGVSAPSLLNVASPNKTW
VGVTGAIVLGTTTALVLEGVLGGLYPGPFWQTHRGLPGEQKAVFFSLGDL
PRAWLGLAGAAVCAVGVLGDLWESLLKRTAMVKVKEFCVWLLSSSACWLI
AVDAVTGGSRETDASTLTSFCACSNWAIIRQLKGRRSLLHFWPQRLPVIR
A*
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