prot_H-canaliculatus_F_contig10905.845.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10905.845.1
Unique Nameprot_H-canaliculatus_F_contig10905.845.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length162
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10905.845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..43
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10905contigH-canaliculatus_F_contig10905:3759..4244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10905.845.1mRNA_H-canaliculatus_F_contig10905.845.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10905 3759..4282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10905.845.1 ID=prot_H-canaliculatus_F_contig10905.845.1|Name=mRNA_H-canaliculatus_F_contig10905.845.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=162bp
DEWQVRNGRRLCLSSSSSSSSSLFFFVVVVAVILVLFLPSRPPVLLLLLS
LRWLSVAGAVVVDDGGDAISLASHVDLSRGGHFGGRFVRSIAAARSAPWL
RTPRRRLLEWAEPLLSPCSVSPRIHRPRRRGRTRLHAFPDGPRPYLIVQK
HPRRQPPAERG*
back to top