prot_H-canaliculatus_F_contig1090.840.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1090.840.1
Unique Nameprot_H-canaliculatus_F_contig1090.840.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length501
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1090.840.1 vs. uniprot
Match: A0A6H5JMN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN8_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 4.460e-134
Identity = 203/261 (77.78%), Postives = 224/261 (85.82%), Query Frame = 0 
Query:  117 QESEAAIVSFAAAAKKRSRSQSDFTEYIGMLEGMRSWGEALTKKRVGCKRMVLGNFKRGNLVCIAAAEVVWSTGYLSRDVRLSLRLLVVNPKYGMRKVGFETIKRMKAFGRQNALLLDLSPLMAVPSLRVFCLESTQTLDEDPEGLFQARNISLHDPLVQQYNSRVRRCCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAVNEYEVTLQRPGAGLSTGSGTVGGARVIPMDE---------------VRRRVASRL 362
            +ESEAAI+SFA +AK+ SR+QS++ ++I +L+GMRSWG+ LT+KRVGCKR+VLGNFKRGNLVCIAAA+VVWSTGYLSRDVRLSL L+ VNPKY MRKVGFETIKRMK+FG QNALLLDLSPLMAVP LRVFCLESTQTLDEDPEG+FQ       DPLVQQYNSRVRR CYVLDDIP WADLGPYWYEGVLPR VRFFFRKRFHAVNE+EVTLQRPGAGLSTGSGTVGGARVI MDE               + RR+ASRL
Sbjct:  103 EESEAAILSFADSAKRHSRTQSEYDDHIELLQGMRSWGQPLTQKRVGCKRLVLGNFKRGNLVCIAAAQVVWSTGYLSRDVRLSLALIAVNPKYDMRKVGFETIKRMKSFGMQNALLLDLSPLMAVPRLRVFCLESTQTLDEDPEGVFQ-------DPLVQQYNSRVRRSCYVLDDIPTWADLGPYWYEGVLPRSVRFFFRKRFHAVNEFEVTLQRPGAGLSTGSGTVGGARVIAMDEAEAATEIPGHGKVREIERRLASRL 356
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BLAST of mRNA_H-canaliculatus_F_contig1090.840.1 vs. uniprot
Match: D8LH52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH52_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 9.060e-134
Identity = 202/261 (77.39%), Postives = 222/261 (85.06%), Query Frame = 0 
Query:  117 QESEAAIVSFAAAAKKRSRSQSDFTEYIGMLEGMRSWGEALTKKRVGCKRMVLGNFKRGNLVCIAAAEVVWSTGYLSRDVRLSLRLLVVNPKYGMRKVGFETIKRMKAFGRQNALLLDLSPLMAVPSLRVFCLESTQTLDEDPEGLFQARNISLHDPLVQQYNSRVRRCCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAVNEYEVTLQRPGAGLSTGSGTVGGARVIPMDE---------------VRRRVASRL 362
            +ESEAAI+SFA +AK+  R+QSD+ ++I +L+GMRSWG+ LT+KRVGCKR+VLGNFKRGNLVCIAAA+VVWSTGYLSRDVRLSL L+ VNPKY MRKVGFETIKRMK+FG QNALLLDLSPLM VP LRVFCLESTQTLDEDPEG+FQ       DPLVQQYNSRVRR CYVLDDIP WADLGPYWYEGVLPR VRFFFRKRFHAVNE+EVTLQRPGAGLSTGSGTVGGARVI MDE               + RR+ASRL
Sbjct:   63 EESEAAILSFADSAKRHCRTQSDYDDHIELLQGMRSWGQPLTQKRVGCKRVVLGNFKRGNLVCIAAAQVVWSTGYLSRDVRLSLALIAVNPKYDMRKVGFETIKRMKSFGMQNALLLDLSPLMTVPRLRVFCLESTQTLDEDPEGVFQ-------DPLVQQYNSRVRRSCYVLDDIPTWADLGPYWYEGVLPRSVRFFFRKRFHAVNEFEVTLQRPGAGLSTGSGTVGGARVIAMDEAEAATEIPGHGKVREIERRLASRL 316
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BLAST of mRNA_H-canaliculatus_F_contig1090.840.1 vs. uniprot
Match: A0A835YSI1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 4.110e-61
Identity = 117/249 (46.99%), Postives = 158/249 (63.45%), Query Frame = 0 
Query:  108 DAFRDAVLEQESEAAIVSFAAAAKKRSRSQSDFTEYIGMLEGMRSWGEALTK-KRVGCKRMVLGNFKRGNLVCIAAAEVVWSTGYLSRDVRLSLRLLVVNPKYGMRKVGFETIKRMKAFGRQNALLLDLSPLMAVPSLRVFCLESTQTLDEDPEGLFQARNISLHDPLVQQYNSRVRRCCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAV-NEYEVTLQRPGAGLSTGSGTVGGARVIPMDEV 354
            D  R     Q  EA + ++ A A K  +S ++  E + M+  MR W +   K KR+GCK+M LG+++ G L+ +AA ++ W  G+  RDVR+ +RLL +NP +  R VGFE ++ +KA GR NALLLD S L  VP LRVF L S +TLD DPE         L DP    Y S V+R C+VLD+IP+WADLGP+W+EG    GV F+FRKR   + NE+E++   P AG +TGSGTVGGARVI + E+
Sbjct:   15 DGLRPMTAAQVKEA-LANYKAGAFKYCQSSAEQKEQLEMISMMREWADTFEKYKRIGCKKMTLGSYRAGRLLSVAALQIEWR-GFPERDVRMVVRLLALNPMHDKRIVGFEMMESLKALGRDNALLLDCSALREVPCLRVFALGSIRTLDADPE---------LVDPRKLFYKSHVKRTCFVLDNIPEWADLGPFWFEGTTHDGVSFWFRKRTPMLLNEFEISWDHPKAGNATGSGTVGGARVIGIGEL 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1090.840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JMN8_9PHAE4.460e-13477.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH52_ECTSI9.060e-13477.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSI1_9STRA4.110e-6146.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 417..438
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 439..449
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 473..496
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 468..472
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 450..467
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 497..500
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..416
NoneNo IPR availableTMHMMTMhelixcoord: 417..439
NoneNo IPR availableTMHMMTMhelixcoord: 473..495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1090contigH-canaliculatus_F_contig1090:15617..20717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1090.840.1mRNA_H-canaliculatus_F_contig1090.840.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1090 12916..20990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1090.840.1 ID=prot_H-canaliculatus_F_contig1090.840.1|Name=mRNA_H-canaliculatus_F_contig1090.840.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=501bp
MRRSISSRTWLKSMHATRFPGRIDKSHAAQALKPQPKRAAITTSYGTPGR
IAIPTSTTRVAYPCPAVSVVPCVLLVCTFDVQPSPPRARCSSLSHGAVSP
LCLCARRDAFRDAVLEQESEAAIVSFAAAAKKRSRSQSDFTEYIGMLEGM
RSWGEALTKKRVGCKRMVLGNFKRGNLVCIAAAEVVWSTGYLSRDVRLSL
RLLVVNPKYGMRKVGFETIKRMKAFGRQNALLLDLSPLMAVPSLRVFCLE
STQTLDEDPEGLFQARNISLHDPLVQQYNSRVRRCCYVLDDIPKWADLGP
YWYEGVLPRGVRFFFRKRFHAVNEYEVTLQRPGAGLSTGSGTVGGARVIP
MDEVRRRVASRLVASPLVRLCHARLCVLSGVFVPLSHHNFRHYHSKSRAR
HRATVWLACLEPELHRFIYLFIYLFFHVVLLCFVSFRISRLCRARGCRRC
AAPLFALLCSWFCYFRRCCRSSLLLFSFFYSFSFFSCCSLFDVAFVHRVY
*
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