prot_H-canaliculatus_F_contig10813.769.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10813.769.1
Unique Nameprot_H-canaliculatus_F_contig10813.769.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length116
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10813.769.1 vs. uniprot
Match: A0A6H5J746_9PHAE (UBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J746_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.740e-24
Identity = 62/85 (72.94%), Postives = 65/85 (76.47%), Query Frame = 0 
Query:   32 SQTRHDPETARLARLAALEGRTATGREEGQGGAERARGETA-PLLAASDHDIMTLQDMGFTSTEAREALQFTNGDVEAAASYLAA 115
            S  RHDPETARLARLAALEGRT      G         E A PLLAASDHD++TLQDMGFT+ EAREALQFTNGDVEAAASYLAA
Sbjct:  341 SGRRHDPETARLARLAALEGRT------GAXXXXXXXXEAAAPLLAASDHDVLTLQDMGFTAAEAREALQFTNGDVEAAASYLAA 419
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BLAST of mRNA_H-canaliculatus_F_contig10813.769.1 vs. uniprot
Match: A0A835Z2V1_9STRA (UBA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.350e-7
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:   69 GETAPLLAASDHDIMTLQDMGFTSTEAREALQFTNGDVEAAASYLA 114
            G T+ LL+ +DH++M LQDMG+++ +AREAL  T GD+ AA +YLA
Sbjct:  371 GATSSLLSNTDHEVMMLQDMGYSADDAREALTHTEGDINAAVAYLA 416
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10813.769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J746_9PHAE1.740e-2472.94UBA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z2V1_9STRA4.350e-754.35UBA domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 78..115
e-value: 3.2E-7
score: 40.0
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 82..113
e-value: 1.8E-9
score: 37.3
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 76..115
score: 12.499
NoneNo IPR availableGENE3D1.10.8.10coord: 78..115
e-value: 5.7E-11
score: 44.2
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 59..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10813contigH-canaliculatus_F_contig10813:3543..4485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10813.769.1mRNA_H-canaliculatus_F_contig10813.769.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10813 2022..4599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10813.769.1 ID=prot_H-canaliculatus_F_contig10813.769.1|Name=mRNA_H-canaliculatus_F_contig10813.769.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=116bp
MCRTAKYTRLTALHCVVCHRLTALHDLGCSGSQTRHDPETARLARLAALE
GRTATGREEGQGGAERARGETAPLLAASDHDIMTLQDMGFTSTEAREALQ
FTNGDVEAAASYLAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR015940UBA