prot_H-canaliculatus_F_contig10755.719.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10755.719.1
Unique Nameprot_H-canaliculatus_F_contig10755.719.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length65
Homology
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A643C2B2_BALPH (Uncharacterized protein (Fragment) n=1 Tax=Balaenoptera physalus TaxID=9770 RepID=A0A643C2B2_BALPH)

HSP 1 Score: 87.0 bits (214), Expect = 6.830e-20
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            FNPQG R+LT SSDK AR+WD  TG CLQ+LEGHTDEIFSCAFNY
Sbjct:   80 FNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 124          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A5N4E733_CAMDR (Dynein assembly factor with WDR repeat domains 1 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4E733_CAMDR)

HSP 1 Score: 89.0 bits (219), Expect = 3.070e-19
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            FNPQG+R+LT SSDK AR+WDA TG CLQ+LEGHTDEIFSCAFNY
Sbjct:  376 FNPQGSRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 420          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A8D1EEP9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1EEP9_PIG)

HSP 1 Score: 87.4 bits (215), Expect = 3.620e-19
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            FNPQG R+LT S+DK AR+WDA TG CLQ+LEGHTDEIFSCAFNY
Sbjct:  228 FNPQGNRLLTGSADKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 272          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A8D1K9R8_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1K9R8_PIG)

HSP 1 Score: 87.4 bits (215), Expect = 1.060e-18
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            FNPQG R+LT S+DK AR+WDA TG CLQ+LEGHTDEIFSCAFNY
Sbjct:  351 FNPQGNRLLTGSADKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 395          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A2G9RJ73_LITCT (Uncharacterized protein (Fragment) n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RJ73_LITCT)

HSP 1 Score: 82.8 bits (203), Expect = 4.400e-18
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            FN QG+RILTASSDK A LWD  TG C+Q+LEGHTDEIFSCAFNY
Sbjct:  156 FNAQGSRILTASSDKTACLWDPQTGQCVQVLEGHTDEIFSCAFNY 200          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A0G4GWY9_9ALVE (Uncharacterized protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWY9_9ALVE)

HSP 1 Score: 76.3 bits (186), Expect = 7.500e-17
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            F+P G ++LTASSD   RLW ADTG  LQ+LEGHTDEIFSCAFNY
Sbjct:    3 FSPNGAKVLTASSDWTCRLWRADTGALLQVLEGHTDEIFSCAFNY 47          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A2P4TGK6_BAMTH (Uncharacterized protein n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4TGK6_BAMTH)

HSP 1 Score: 79.3 bits (194), Expect = 1.530e-16
Identity = 36/41 (87.80%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    5 GTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            G RILTASSDK ARLWDA TG CLQ LEGHTDEIFSCAFNY
Sbjct:  153 GNRILTASSDKTARLWDAATGHCLQTLEGHTDEIFSCAFNY 193          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A7J6LPN1_PEROL (U4 u6 small nuclear ribonucleoprotein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LPN1_PEROL)

HSP 1 Score: 80.1 bits (196), Expect = 4.200e-16
Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNY 45
            F+P G R+LTA+SD   R+WD++TG+CLQ+LEGHTDE+FSCAFNY
Sbjct:  318 FSPTGCRVLTAASDHTCRVWDSNTGECLQVLEGHTDEVFSCAFNY 362          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: UPI0003F0EC26 (dynein assembly factor with WDR repeat domains 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0EC26)

HSP 1 Score: 78.6 bits (192), Expect = 1.520e-15
Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCA 42
            FNPQGT++LTAS+DK ARLW+  TG+CLQ+LEGHTDEIFSCA
Sbjct:  354 FNPQGTKLLTASADKTARLWNPLTGECLQVLEGHTDEIFSCA 395          
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Match: A0A8C8ACZ8_9STRI (Uncharacterized protein n=1 Tax=Otus sunia TaxID=257818 RepID=A0A8C8ACZ8_9STRI)

HSP 1 Score: 72.4 bits (176), Expect = 1.710e-15
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIF 39
            FNP+G  ILTASSDK ARLWDA TG CLQILEGHTDEIF
Sbjct:   25 FNPKGNCILTASSDKTARLWDAATGHCLQILEGHTDEIF 63          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10755.719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A643C2B2_BALPH6.830e-2080.00Uncharacterized protein (Fragment) n=1 Tax=Balaeno... [more]
A0A5N4E733_CAMDR3.070e-1982.22Dynein assembly factor with WDR repeat domains 1 n... [more]
A0A8D1EEP9_PIG3.620e-1980.00Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
A0A8D1K9R8_PIG1.060e-1880.00Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
A0A2G9RJ73_LITCT4.400e-1880.00Uncharacterized protein (Fragment) n=1 Tax=Lithoba... [more]
A0A0G4GWY9_9ALVE7.500e-1773.33Uncharacterized protein (Fragment) n=1 Tax=Chromer... [more]
A0A2P4TGK6_BAMTH1.530e-1687.80Uncharacterized protein n=1 Tax=Bambusicola thorac... [more]
A0A7J6LPN1_PEROL4.200e-1668.89U4 u6 small nuclear ribonucleoprotein n=1 Tax=Perk... [more]
UPI0003F0EC261.520e-1578.57dynein assembly factor with WDR repeat domains 1-l... [more]
A0A8C8ACZ8_9STRI1.710e-1584.62Uncharacterized protein n=1 Tax=Otus sunia TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 24..63
e-value: 3.7E-10
score: 49.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 25..62
e-value: 9.2E-10
score: 39.0
coord: 1..21
e-value: 0.19
score: 12.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..30
score: 12.447
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 31..64
score: 14.385
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..64
e-value: 8.7E-25
score: 89.6
NoneNo IPR availablePANTHERPTHR44156:SF1DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1coord: 1..63
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 1..63
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 8..22
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..64
score: 22.201
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10755contigH-canaliculatus_F_contig10755:3844..4650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10755.719.1mRNA_H-canaliculatus_F_contig10755.719.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10755 3844..4650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10755.719.1 ID=prot_H-canaliculatus_F_contig10755.719.1|Name=mRNA_H-canaliculatus_F_contig10755.719.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=65bp
FNPQGTRILTASSDKVARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTI
ITGSKDNTCRLWRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat