prot_H-canaliculatus_F_contig1064.624.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1064.624.1
Unique Nameprot_H-canaliculatus_F_contig1064.624.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length222
Homology
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 2.490e-123
Identity = 185/221 (83.71%), Postives = 198/221 (89.59%), Query Frame = 0
Query:    1 MVASQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            MVA+Q+FLG+AA LI SS AFVAPMAVRS APA+SSS+LKM SAGS YV TLPGAPFGDGKIFDPL LSDGA P DIKKWREAEIKHGRVAMLASLGVLVAEQ+HP FMGPDYIGPAVDHFQEI+AQ+PEFWVFSLLGMA IEY TI TAF  P AVTGEGGLKEDY PGDLGFDPL +KP+ EA L  M+TKELNNGRLAMIGIAGMLVQEL+NPA+ILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKM-SAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 1.000e-120
Identity = 179/218 (82.11%), Postives = 195/218 (89.45%), Query Frame = 0
Query:    4 SQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            S MFLGTAA LI SS AFVAPMAVRS APA+S+S+LKM SAGS YV TLPGAPFGDGKIFDPL LSDGA PG+IK WREAEIKHGRVAMLA++GV+VAEQ+HP FMGPDYIGPAVDHFQEI+AQFPEFW FSLLGMA IEY TIT A+AEP  VTGEGGL+++YSPGDLGFDPL +KPK +A L  MQTKELNNGRLAMIGIAGMLVQELVNPA+ILG
Sbjct:    5 SNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKM-SAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 1.440e-116
Identity = 178/220 (80.91%), Postives = 192/220 (87.27%), Query Frame = 0
Query:    1 MVASQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANIL 220
            MVASQMFLGTAAALI SS AFVAP+AVRS APA+++S+LKM SAGS YV TLPGAPF DGKIFDPL LSDGAAPGDIKKWREAEIKHGRVAMLASLG+LVAE++HP FMG D+IGPA+ HFQEI+AQFPEFW FSLLGMA IEY TI TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVN  +IL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKM-SAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 2.630e-106
Identity = 164/218 (75.23%), Postives = 185/218 (84.86%), Query Frame = 0
Query:    4 SQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            S MFLGTAA LI SS AFV PMAVRS APA+S+S+LKM SAG+ Y+ TLPGA   +GKIFD L L+DGA PG+IK WREAEIKHGRVAMLA++GV+VAEQ+HPFFMGPDYIGPAVDHFQEITA+FP+FW +SLLGMA IEY TI  A+AEP  VTGEGGL+++YSPGDLGFDP  IKPK +A L  MQ KELNNGRLAMIGI GMLVQELVN  +ILG
Sbjct:    5 SNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKM-SAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 1.120e-95
Identity = 138/161 (85.71%), Postives = 146/161 (90.68%), Query Frame = 0
Query:   61 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            +IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGV+VAEQ+HPFFMGPDYIGPAVDHFQEI+AQFPEFW FSLLGMA +EY TI TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 2.280e-94
Identity = 160/221 (72.40%), Postives = 165/221 (74.66%), Query Frame = 0
Query:    1 MVASQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            MVASQMF+GTAA LI SS AFVAPMAVRSV    SS  LKM SAGS YV TLPGAPF DGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMA IEY TI TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKM-SAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 5.960e-94
Identity = 186/392 (47.45%), Postives = 194/392 (49.49%), Query Frame = 0
Query:    1 MVASQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVETLPGAPFGDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            MVASQMF+GTAA LI SS AFVAP+AVRSVA  T SSS  M SAGS YV TLPGAPF DGK                                                                                                                                                                           IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGV+VAEQ+HPFFMGPDYIGPAVDHFQEI+AQFPEFW FSLLGMA IEY TI TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 9.010e-91
Identity = 131/160 (81.88%), Postives = 143/160 (89.38%), Query Frame = 0
Query:   61 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANIL 220
            KIFDPLGL+DGA  GDIK WREAEIKHGRVAMLASLGVLVAE++HPFFMGPDYIGPAVDHFQEI+A+FPEFW FSLL +ALIEY TIT A+AEP  VTGEGGL+++YSPGDLGFDPL +KP  +  L TMQTKELNNGRLAMIGIAG LVQELVNP NIL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 3.180e-86
Identity = 127/179 (70.95%), Postives = 147/179 (82.12%), Query Frame = 0
Query:   43 SAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 221
            SAGS YV TLPGAPF DGK++DP+GLS  A P DIKKWREAEIKHGRVAMLAS+GVLVAE FHP F+GPDYIGPA+ HF+EITA+FP+FW  +LL +A +EYR I   FAE D VTGEGG++ DY PGDLGFDPLG+ P+ E +L  M+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   93 SAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 4.790e-74
Identity = 130/225 (57.78%), Postives = 161/225 (71.56%), Query Frame = 0
Query:    1 MVASQMFLGTAAALITSSVAFVAPMAV--RSVAPATSSSSLKMQSAGSAYVETLPGAPFG---DGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANIL 220
            MV SQ+FLGTAA LI SS AFVAP+A    S+A   +SS+ KM +AGS Y  +LPGAPFG   +GK FDP GL+    P  IKKWREAE+KHGRV+MLA++G+LV+E FHP FMGP YIGPAV+H Q+I   +P FWV SL  +A IE +TI  A+     VTG G LK +Y PGDLGFDPLG+ PK   D   +Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKM-TAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1064.624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI2.490e-12383.71Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI1.000e-12082.11Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI1.440e-11680.91Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI2.630e-10675.23Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI1.120e-9585.71Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE2.280e-9472.40LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5JWB4_9PHAE5.960e-9447.45LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI9.010e-9181.88Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI3.180e-8670.95Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI4.790e-7457.78Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 36..220
e-value: 2.1E-37
score: 130.7
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 51..212
e-value: 4.3E-38
score: 131.4
NoneNo IPR availablePANTHERPTHR21649:SF63coord: 9..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.613
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 59..220
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 9..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1064contigH-canaliculatus_F_contig1064:7368..9261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1064.624.1mRNA_H-canaliculatus_F_contig1064.624.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1064 7218..10320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1064.624.1 ID=prot_H-canaliculatus_F_contig1064.624.1|Name=mRNA_H-canaliculatus_F_contig1064.624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=222bp
MVASQMFLGTAAALITSSVAFVAPMAVRSVAPATSSSSLKMQSAGSAYVE
TLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVLV
AEQFHPFFMGPDYIGPAVDHFQEITAQFPEFWVFSLLGMALIEYRTITTA
FAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRL
AMIGIAGMLVQELVNPANILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf