prot_H-canaliculatus_F_contig10608.591.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10608.591.1
Unique Nameprot_H-canaliculatus_F_contig10608.591.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length166
Homology
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: D7FUS9_ECTSI (DNA repair protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS9_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 2.140e-89
Identity = 135/166 (81.33%), Postives = 144/166 (86.75%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFKVTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKVMQERWAKSEEEMGHGG 166
            RCDEKI KGALK+GVVTEGSWGPSTQWHH+ CTVFKVTTP+EVEGYG+LDDA Q +LEQ+V               PDDLVR+EWTEKA CPDD+MATLLPYQAEGLAWMLNQEKL YKGGILADEMGMGKTLQAICTIVANRV+KKDKVMQERWAKSEEEMG GG
Sbjct:   17 RCDEKIMKGALKIGVVTEGSWGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTEKANCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGG 182          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A6H5JN56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN56_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 2.360e-86
Identity = 136/166 (81.93%), Postives = 146/166 (87.95%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFKVTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKVMQERWAKSEEEMGHGG 166
            RCDEKITKGALK+GVVTEGSWGPSTQWHH+ CTVFKVTTP+EVEGYG+LDDA Q +LEQ+V               PDDLVR+EWT+KAKCPDD+MATLLPYQAEGLAWMLNQEKL YKGGILADEMGMGKTLQAICTIVANRV+KKDKVMQERWAKSEEEMG GG
Sbjct:  231 RCDEKITKGALKIGVVTEGSWGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTDKAKCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGG 396          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A7R9U350_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U350_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.640e-33
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFK-VTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANR 143
            RC++ I KG L+VG + EG +G  T+W H+ C  F  +  P++V+G+  LD+  +  L  ++               PD  VR+ WTEK   P D+   LLPYQ EGLAWM++QE+  ++GGILADEMGMGKTLQ I TIV NR
Sbjct:  211 RCNQMIPKGVLRVGEILEGDFGLYTRWLHLSCAYFTGIRKPEDVKGFTALDEEQRAQLTARLEETQDKVPADMRAVEPDACVRKAWTEKRATPKDIKLPLLPYQQEGLAWMIHQEESDHRGGILADEMGMGKTLQTIATIVENR 354          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A482RXU1_9ARCH (PARP-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXU1_9ARCH)

HSP 1 Score: 129 bits (323), Expect = 4.730e-33
Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVF--KVTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKVMQERWAKSEEEMGH 164
            +CD KI    L+VGV+ EG WG  T+W H+ CT+F   +T+  +++GY  L  + + +++++                PD+L+R+ W +  +   D++  LLPYQ EGL W + QE+    GGILADEMGMGKT+QAI  ++ NR  + D  ++E WA S+    H
Sbjct:   58 KCDIKIEHKLLRVGVIVEGEWGLFTRWQHLDCTIFHKSLTSVDQIDGYLILSPSDKLLVQERFEASKHEVDEDSVPIDPDELIRKSWNQPLEPHADLLMPLLPYQKEGLGWCVAQERSDVHGGILADEMGMGKTIQAIALMLHNRPARGDAELEEVWAASDNAHAH 223          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A7S1XLE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLE0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 6.870e-33
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFK-VTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANR 143
            RC+  I K  L+VG   EG +G  T+W H++C  F  + +P++V G+  LD+  Q  +  ++               P++ VR  WTEKA  P D+   LLPYQ EGLAWML+QEK  ++GGILADEMGMGKTLQ I T+VA+R
Sbjct:  185 RCNTLIAKAELRVGEQLEGEFGLYTRWLHLKCAWFTGIQSPEDVAGWAALDEESQDAIADRLDKTQSEVAVDMRPVDPNECVRAAWTEKAATPVDIRLPLLPYQQEGLAWMLHQEKSDHRGGILADEMGMGKTLQTIATMVAHR 328          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A7S3MHT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHT9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.070e-32
Identity = 61/161 (37.89%), Postives = 96/161 (59.63%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFK--VTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKVMQERWAKSE 159
            +CD KI    +++GV+ +G WG  T+W H+ CTVF   + + +E++G+ +L+   + +++++                PD+LVR+ W +  +   +++  LLPYQ EGL WM+NQE+    GGILADEMGMGKT+QAI  ++ NR D  D      WA S+
Sbjct:   49 KCDCKIENKCIRIGVIVDGEWGLFTRWQHLDCTVFHKGINSVEELDGFSDLNTQQKDLVKERFALSANEIDEDMEPIDPDELVRKAWEKPVEPSPNLLMPLLPYQKEGLGWMVNQEQNDVHGGILADEMGMGKTIQAIALMLQNRPDMSDFAQLREWAASD 209          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: W7TXY3_9STRA (Snf2 super family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXY3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.990e-28
Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    1 RCDEKITKGALKVGV-VTEGSWGPSTQWHHMQCTVFK--VTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKVMQERWAKSEEEMGHG 165
            +C+ K+ K  +++G+ +  G +G  T+W H+ CT+F   + + + +EGY  L +  Q +++++V                 +LVR+EWT + + P+ ++  +LPYQ EGL WM  QE++ + GGILADEMGMGKT+QAI  ++ANR     ++  E W +  +E  HG
Sbjct:  125 KCNAKVPKEEIRIGLEMNAGRFGIVTRWQHLPCTIFAEYLESEESIEGYEYLTEGQQALVKKRVAESREEEDEDSKPIDASELVRKEWTTQREPPETLVLPILPYQKEGLGWMYRQEQVEHHGGILADEMGMGKTIQAIAVMLANR---PSELHSEAWTR--QEASHG 287          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A836CRA2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.060e-25
Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   25 TQWHHMQCTVFKVTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQE-KLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKVMQERWAKSEEEM 162
            T WHH+ C V    T  ++EGY +L +  Q +L+++V               PDDL+R+ W +KA  P ++++ LLPYQ EGL W+L+QE +  ++GGILADEMG  KT+QAI  ++ANR   KDK     W  +E  M
Sbjct:    2 TAWHHLACVVPHCNTAADIEGYDDLPEEQQQVLQERVDESRGQVDELYQPINPDDLIRKAWDKKAPQPPELLSPLLPYQLEGLGWLLHQELEEEHRGGILADEMG--KTIQAISLMLANRPHAKDKQQCSAWTAAEAGM 138          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: A0A1X0P4C3_9TRYP (DNA repair protein n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P4C3_9TRYP)

HSP 1 Score: 97.4 bits (241), Expect = 1.910e-20
Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 0
Query:    1 RCDEKITKGALKVGVV---TEGSWGPSTQWHHMQCTVF--KVTTPQEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRV 144
            RC + ITKG LK G+    + G +G  T W H+ CT    K  T   V G+ +L    Q  + ++V               P+DL+++ +  + + P  ++  LL YQ EGL WM+NQEK   KGGILADEMGMGKT+Q I   +ANR+
Sbjct:   44 RCSQYITKGDLKWGIPIRHSHGEYGWITAWQHIGCTRISEKNDTTDFVFGFSDLSLQEQKEVWEEVTSSRIPSHLLPLD--PEDLIKRGFLPEVEPPRQLLRPLLRYQKEGLGWMVNQEKSNIKGGILADEMGMGKTIQMISLFLANRL 190          
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Match: W6KR75_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KR75_9TRYP)

HSP 1 Score: 97.1 bits (240), Expect = 2.610e-20
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 0
Query:    1 RCDEKITKGALKVGV---VTEGSWGPSTQWHHMQCTVFKVTTP--QEVEGYGELDDAVQPILEQQVXXXXXXXXXXXXXXXPDDLVRQEWTEKAKCPDDVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRV 144
            +C + I KG  + G+      G +G  + W H+ CT  + +    + + G+ +L++  +  +  +V               PDDL+++   E+A+ P +V+ TLLPYQ EGL WML QE    KGGILADEMGMGKT+Q I  +VA+ V
Sbjct:   44 KCSQYINKGEFRCGIPVRFASGEYGWISAWQHLGCTRIEESEDLTKVMHGFAQLEEMQRKEIISEVTSSETPEHLRTLD--PDDLIKRRKLEEAETPKEVLRTLLPYQREGLNWMLAQECSDAKGGILADEMGMGKTIQMISLLVAHPV 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10608.591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUS9_ECTSI2.140e-8981.33DNA repair protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JN56_9PHAE2.360e-8681.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9U350_9STRA1.640e-3345.83Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A482RXU1_9ARCH4.730e-3337.95PARP-type domain-containing protein n=1 Tax=archae... [more]
A0A7S1XLE0_9STRA6.870e-3345.83Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3MHT9_9STRA4.070e-3237.89Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7TXY3_9STRA7.990e-2835.71Snf2 super family n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A836CRA2_9STRA2.060e-2541.73P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1X0P4C3_9TRYP1.910e-2039.60DNA repair protein n=1 Tax=Trypanosoma theileri Ta... [more]
W6KR75_9TRYP2.610e-2036.91Uncharacterized protein n=1 Tax=Phytomonas sp. iso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001510Zinc finger, PARP-typeSMARTSM01336zf_PARP_3coord: 1..62
e-value: 0.0041
score: 15.3
IPR001510Zinc finger, PARP-typePFAMPF00645zf-PARPcoord: 2..59
e-value: 1.4E-6
score: 29.1
IPR001510Zinc finger, PARP-typePROSITEPS50064PARP_ZN_FINGER_2coord: 1..32
score: 8.724
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 76..155
e-value: 9.4E-16
score: 59.3
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 118..152
e-value: 9.7E-9
score: 34.4
IPR036957Zinc finger, PARP-type superfamilyGENE3D3.30.1740.10coord: 1..75
e-value: 5.8E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 82..147
NoneNo IPR availablePANTHERPTHR45626:SF12DNA REPAIR PROTEIN RAD16coord: 82..147
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 2..80
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 81..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10608contigH-canaliculatus_F_contig10608:1794..4691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10608.591.1mRNA_H-canaliculatus_F_contig10608.591.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10608 1792..4691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10608.591.1 ID=prot_H-canaliculatus_F_contig10608.591.1|Name=mRNA_H-canaliculatus_F_contig10608.591.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=166bp
RCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFKVTTPQEVEGYGELD
DAVQPILEQQVIKSQGEVDDMYEPITPDDLVRQEWTEKAKCPDDVMATLL
PYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVDKKDKV
MQERWAKSEEEMGHGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR036957Znf_PARP_sf
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR001510Znf_PARP