prot_H-canaliculatus_F_contig106.577.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig106.577.1
Unique Nameprot_H-canaliculatus_F_contig106.577.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length414
Homology
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BLAST of mRNA_H-canaliculatus_F_contig106.577.1 vs. uniprot
Match: D7FMC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMC0_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 2.890e-92
Identity = 151/271 (55.72%), Postives = 197/271 (72.69%), Query Frame = 0 
Query:  143 EKNCGLTTRRWHQIIAVGVGLLEVAFSVYNALAEDSFKMLDPTDFVFSASAAMESVGLAVTLFAALCREISREEGQGGRGPVLETLGSPLAILVNGVRQKERSLAKVGHFGAMCQTAVVSVVGMVLLQRIDKRIFVILFYVIFLLLAGFCLAAHSRCCENWIKDVLIVSRSDSTLEPEDAAAGIMYALVMLPLGVEVAEVVLLVFGGGSWNATILALLDFAVASALLFPHGYKHFMRSCPEAAQRLTRDSWPNCP-FPVFCHVDNLVRIFF 412
            EK+CGLT+RRWHQ+ A+G+GLLE AFS+ NA+AED+FK+ D   FVFSASA  ESVGLAV L  +LCR        G +  V+E  GSPLAILVNGVRQ +RSL K GHFGAMCQ AVV+V G+VLLQ++D R FVILFY + +L  GFCL  ++  C  + +++++VSR DS L+P++ A G+ YAL+ LPLGV+VAE++ L  GG SWNATILALLD  V + ++FP GYK FM + PEAA+RL  DS   C  +   C+++ L+ + F
Sbjct:   87 EKSCGLTSRRWHQLFALGIGLLEAAFSLNNAIAEDAFKIEDAASFVFSASAVQESVGLAVMLLLSLCRA-----RVGEQDAVMEEFGSPLAILVNGVRQTDRSLTKTGHFGAMCQAAVVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLVTNTVFCAGYFRNLVVVSRLDSALDPDNPAVGLTYALIALPLGVDVAEILFLFLGGQSWNATILALLDVGVTAMVVFPFGYKRFMTAFPEAARRLGLDSGRACDHYYCCCNLETLLYVVF 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig106.577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMC0_ECTSI2.890e-9255.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 271..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..208
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 371..413
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 322..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..370
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..321
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 347..351
NoneNo IPR availableTMHMMTMhelixcoord: 325..347
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 352..374
NoneNo IPR availableTMHMMTMhelixcoord: 250..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig106contigH-canaliculatus_F_contig106:4500..5741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig106.577.1mRNA_H-canaliculatus_F_contig106.577.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig106 4163..7083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig106.577.1 ID=prot_H-canaliculatus_F_contig106.577.1|Name=mRNA_H-canaliculatus_F_contig106.577.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=414bp
MPCAELATEFQARSVIPSSTLAAREPGASDQHRDGSHSWNWTRTGAAHVA
EVPDLEGGARGAPPIQTEVIVGHRSAVGPIAAVADEPVERGSHRDDSHPD
RGVPFIVEVQDLEGGASTPPIEIEAPGGRRAITATTLETTAAEKNCGLTT
RRWHQIIAVGVGLLEVAFSVYNALAEDSFKMLDPTDFVFSASAAMESVGL
AVTLFAALCREISREEGQGGRGPVLETLGSPLAILVNGVRQKERSLAKVG
HFGAMCQTAVVSVVGMVLLQRIDKRIFVILFYVIFLLLAGFCLAAHSRCC
ENWIKDVLIVSRSDSTLEPEDAAAGIMYALVMLPLGVEVAEVVLLVFGGG
SWNATILALLDFAVASALLFPHGYKHFMRSCPEAAQRLTRDSWPNCPFPV
FCHVDNLVRIFFP*
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