prot_H-canaliculatus_F_contig10594.575.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10594.575.1
Unique Nameprot_H-canaliculatus_F_contig10594.575.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length248
Homology
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 7.650e-110
Identity = 187/235 (79.57%), Postives = 203/235 (86.38%), Query Frame = 0
Query:    5 VCNVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMP-------EFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQLAREENAWRRRNAQA 232
            V NVGAPAWSILAVTFTKKASEEMR RVRK +GEDVSGQVALGTFHS CARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLT+I+KEM  DIKEVKPN++RSSISKLKSQG+ P       E M+   +S G+VG   + AK +AEIY+ YQ RL+QSNALDFDDIILVALRLLR+D EVFR+VGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQ ARE+N   RR AQA
Sbjct:  123 VRNVGAPAWSILAVTFTKKASEEMRARVRKTVGEDVSGQVALGTFHSICARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTDIIKEMGQDIKEVKPNMMRSSISKLKSQGLGPQDIAKKSEDMLERGKSTGFVGGKARHAKMVAEIYTKYQARLIQSNALDFDDIILVALRLLRQDKEVFRSVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQQAREDN---RRAAQA 354          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A7I9XYF2_9MYCO (ATP-dependent DNA helicase n=1 Tax=Mycobacterium botniense TaxID=84962 RepID=A0A7I9XYF2_9MYCO)

HSP 1 Score: 160 bits (405), Expect = 1.940e-41
Identity = 89/202 (44.06%), Postives = 132/202 (65.35%), Query Frame = 0
Query:   15 ILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            ILA+TFT KA+ EMR RV + +G      + + TFHS CAR+LR H     +++PGL+  FSI+D +DSRRLL  I++++ LDIK   P ++  +IS LK++ + PE  +A+   +     A   A+ +AE+Y  YQRRL  +NALDFDD+I   + +L+   ++ +   R++RHILVDE+QDTN  QY +V E+V  GR+A
Sbjct:   68 ILAITFTNKAAAEMRDRVVQLIGARAGRSLWVSTFHSMCARILRNHA----SLIPGLNSNFSIYDADDSRRLLQMIVRDIGLDIKRYSPRLLAHAISNLKNEVIDPEKAVANASDR-----ADDFARTVAEVYGEYQRRLRAANALDFDDLIGETVGILQSFPQIAQHYRRRFRHILVDEYQDTNHAQYVLVRELV--GRDA 258          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A3N5UTJ7_9CHLR (DNA helicase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UTJ7_9CHLR)

HSP 1 Score: 151 bits (382), Expect = 6.510e-41
Identity = 81/201 (40.30%), Postives = 126/201 (62.69%), Query Frame = 0
Query:    9 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEI 209
            G   W ILAVTFT KA++EM+ RV+  L +     + LGTFHS CAR+LRR  + LP     ++  F IFDT+D  R++  +++EMN++ K  +P  V ++IS+ K++ + P+   A+     Y    +KR      +Y  YQ+RL+ SNA+DFDD+++ A RLL ++  V     +++RH+LVDE+QDTN  QY +V ++
Sbjct:   48 GVRPWQILAVTFTNKAAKEMQARVKSLLPDQAIEGIMLGTFHSICARILRREAEHLP-----IESNFVIFDTDDQERIVKTVIREMNINEKLYRPASVHAAISRAKNELIGPDEYPATT----YRDEIVKR------VYVEYQKRLIASNAVDFDDLLVYAARLLEDNPTVRDKYAQRFRHVLVDEFQDTNLAQYALVRQL 233          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI00036A3C52 (DNA helicase PcrA n=1 Tax=Corynebacterium capitovis TaxID=131081 RepID=UPI00036A3C52)

HSP 1 Score: 158 bits (400), Expect = 8.780e-41
Identity = 90/211 (42.65%), Postives = 130/211 (61.61%), Query Frame = 0
Query:    9 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAK---RMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            G   W ILA+TFT KA+ EMR RV + +G +   ++ + TFHS C R+LR+       +VPGL+  FSI+D++DSRRLL  I KE NLD K+  P  + ++IS LK++ + PE        + Y  AA         +A +Y+ YQRRL QSN+LDFDD+I   +R+  +   V     R++RH+LVDE+QDTN  QY+++  +V AG +A
Sbjct:   50 GVAPWQILAITFTNKAAAEMRERVAQLVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNSNFSIYDSDDSRRLLAMIAKETNLDPKKFSPRTLANAISALKNELIGPE--------EAYAEAARTHNPFDTAVAGVYADYQRRLRQSNSLDFDDLIGEVVRIFHQHPPVLDYYRRRFRHVLVDEYQDTNHAQYELIHALVGAGPDA 247          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A7X6RDL0_9CORY (ATP-dependent DNA helicase n=23 Tax=Corynebacterium TaxID=1716 RepID=A0A7X6RDL0_9CORY)

HSP 1 Score: 158 bits (400), Expect = 1.040e-40
Identity = 86/208 (41.35%), Postives = 132/208 (63.46%), Query Frame = 0
Query:    9 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            G   W ILA+TFT KA+ EM+ RV + +G + +G++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLL  I K+ NLD+K+  P  + + IS LK++ + P   + + E              +A++Y  YQRRL +SNALDFDD+I   +R+ +E  +V     R++RH+LVDE+QDTN  QY+++  +V AG +A
Sbjct:   79 GVAPWQILAITFTNKAAAEMKERVSQLVGPE-AGRMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIAKDFNLDLKKFTPRTLANGISNLKNELIGPNEALTNAERTHNPFETT-----VAKVYVEYQRRLRRSNALDFDDLIGEVVRIFQEHPQVTDYYRRRFRHVLVDEYQDTNHAQYELIHTLVGAGPDA 276          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A376CN55_9CORY (ATP-dependent DNA helicase n=2 Tax=Corynebacterium TaxID=1716 RepID=A0A376CN55_9CORY)

HSP 1 Score: 158 bits (399), Expect = 1.360e-40
Identity = 86/208 (41.35%), Postives = 131/208 (62.98%), Query Frame = 0
Query:    9 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            G   W ILA+TFT KA+ EM+ RV   +G     ++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLLT I K+MNLD+K+     + ++IS LK++ + P+   AS ++             +AE+Y  YQ+RL +SNALDFDD+I   +R+ ++  +V     R++RH+LVDE+QDTN  QY++V  +V  G +A
Sbjct:   50 GVAPWQILAITFTNKAAAEMKERVSSLIGPQAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLTMIAKDMNLDLKKFSARTLANAISNLKNELIDPDQASASAQT-----TKNPFETTVAEVYVEYQKRLRESNALDFDDLIGEVVRIFKQHPQVTDYYRRRFRHVLVDEYQDTNHAQYELVHTLVGEGPDA 247          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: M1NWJ1_9CORY (ATP-dependent DNA helicase n=1 Tax=Corynebacterium halotolerans YIM 70093 = DSM 44683 TaxID=1121362 RepID=M1NWJ1_9CORY)

HSP 1 Score: 158 bits (399), Expect = 1.450e-40
Identity = 90/210 (42.86%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    9 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRA--KRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            G   W ILA+TFT KA+ EMR RV   +G   + ++ + TFHS C R+LR+       +VPGL+  F+I+D +DSRRLLT I K++NLD+K+     + ++IS LK++   PE  +A  E       A K      +A+++  YQRRL  SNA+DFDD+I   +R+ RE  +V     R++RH+LVDE+QDTN  QY++V  +V  G EA
Sbjct:   69 GVAPWQILAITFTNKAAAEMRERVAGLIGP-AAERMWVATFHSICVRILRQQAQ----LVPGLNTNFTIYDGDDSRRLLTMIAKDLNLDLKKFTARTLNNAISNLKNELTGPEEALADAE-------ATKNPFETTVAKVFEEYQRRLRSSNAVDFDDLIGEVVRIFREHPQVTEYYRRRFRHVLVDEYQDTNHAQYELVSTLVGTGPEA 266          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI001D0B0315 (UvrD-helicase domain-containing protein n=1 Tax=unclassified Corynebacterium TaxID=2624378 RepID=UPI001D0B0315)

HSP 1 Score: 158 bits (399), Expect = 1.590e-40
Identity = 88/204 (43.14%), Postives = 129/204 (63.24%), Query Frame = 0
Query:    9 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRA 212
            G   W ILA+TFT KA+ EMR RV   +G  V+ ++ + TFHS C R+LR+       VVPGL+  F+I+D++D+RRLLT I K+ +LD+K      + ++IS LK++ + PE   A  +S             +A++Y+ YQ RL Q+NA+DFDD+I   +RLLRE  +V     R++RH+LVDE+QDTN  QY++V  +V A
Sbjct:   92 GVAPWQILAITFTNKAAAEMRERVAGLVGP-VAERMWVATFHSVCVRILRQQA----GVVPGLNSNFTIYDSDDARRLLTMIAKDKSLDLKRFSARTLANAISNLKNELIDPEDAAAEAQS-----TKNPFDTTVADVYAEYQTRLRQANAVDFDDLIGEVVRLLREHDDVAEYYRRRFRHVLVDEYQDTNHAQYELVSVLVGA 285          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI0004BAE910 (DNA helicase PcrA n=1 Tax=Corynebacterium jeddahense TaxID=1414719 RepID=UPI0004BAE910)

HSP 1 Score: 157 bits (398), Expect = 1.750e-40
Identity = 87/210 (41.43%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    7 NVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            N G   W ILA+TFT KA+ EM+ RV + +G D   ++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLL  I K+  LD+K+  P  + + IS  K++ V PE  +A  E              +A++Y+ YQRRL QSNALDFDD+I   +R+ ++  +V     R++RH+LVDE+QDTN  QY+++  +V  G +A
Sbjct:   47 NRGVAPWQILAITFTNKAAAEMKERVAQLVGPDAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIGKDFGLDLKKFSPRTLANGISNHKNELVGPEEALAEAEKTHNPFETT-----VAKVYAEYQRRLRQSNALDFDDLIGEVVRIFKQHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLVGDGADA 246          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A846SPJ0_9CORY (ATP-dependent DNA helicase n=15 Tax=Corynebacterium TaxID=1716 RepID=A0A846SPJ0_9CORY)

HSP 1 Score: 157 bits (398), Expect = 1.860e-40
Identity = 87/210 (41.43%), Postives = 132/210 (62.86%), Query Frame = 0
Query:    7 NVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 216
            N G   W ILA+TFT KA+ EM+ RV + +G +   ++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLL  I K+MNLD+K+  P V+ ++IS LK++ V P+   A  +              +A +++ YQRRL QSNALDFDD+I   +R+ +   +V     R++RH+LVDE+QDTN  QY+++  +V  G +A
Sbjct:   66 NRGVAPWQILAITFTNKAAAEMKERVGQLVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIGKDMNLDLKKFSPRVLANAISNLKNELVDPDQAQAQAQRTHNPFETT-----VANVFAEYQRRLRQSNALDFDDLIGEVVRIFKTHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLVGDGPDA 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP3_ECTSI7.650e-11079.57DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7I9XYF2_9MYCO1.940e-4144.06ATP-dependent DNA helicase n=1 Tax=Mycobacterium b... [more]
A0A3N5UTJ7_9CHLR6.510e-4140.30DNA helicase (Fragment) n=1 Tax=Chloroflexi bacter... [more]
UPI00036A3C528.780e-4142.65DNA helicase PcrA n=1 Tax=Corynebacterium capitovi... [more]
A0A7X6RDL0_9CORY1.040e-4041.35ATP-dependent DNA helicase n=23 Tax=Corynebacteriu... [more]
A0A376CN55_9CORY1.360e-4041.35ATP-dependent DNA helicase n=2 Tax=Corynebacterium... [more]
M1NWJ1_9CORY1.450e-4042.86ATP-dependent DNA helicase n=1 Tax=Corynebacterium... [more]
UPI001D0B03151.590e-4043.14UvrD-helicase domain-containing protein n=1 Tax=un... [more]
UPI0004BAE9101.750e-4041.43DNA helicase PcrA n=1 Tax=Corynebacterium jeddahen... [more]
A0A846SPJ0_9CORY1.860e-4041.43ATP-dependent DNA helicase n=15 Tax=Corynebacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 215..242
NoneNo IPR availableGENE3D3.40.50.300coord: 139..224
e-value: 1.7E-17
score: 65.4
NoneNo IPR availableGENE3D3.40.50.300coord: 3..127
e-value: 2.2E-24
score: 88.1
NoneNo IPR availablePANTHERPTHR11070:SF7DNA HELICASE IIcoord: 8..213
IPR034739UvrD/AddA helicase, N-terminalPFAMPF00580UvrD-helicasecoord: 12..213
e-value: 4.9E-36
score: 124.8
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 8..213
IPR014016UvrD-like helicase, ATP-binding domainPROSITEPS51198UVRD_HELICASE_ATP_BINDcoord: 1..248
score: 27.84
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10594contigH-canaliculatus_F_contig10594:1092..4468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10594.575.1mRNA_H-canaliculatus_F_contig10594.575.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10594 1092..4468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10594.575.1 ID=prot_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=248bp
MQTKVCNVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFH
SACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKE
VKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTY
QRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNG
PQYDIVLEIVRAGREAQLAREENAWRRRNAQAQEQAQTVRREMDGRDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014016UvrD-like_ATP-bd
IPR000212DNA_helicase_UvrD/REP
IPR034739UvrD/AddA_N