prot_H-canaliculatus_F_contig10593.574.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10593.574.1
Unique Nameprot_H-canaliculatus_F_contig10593.574.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length146
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10593.574.1 vs. uniprot
Match: A0A6H5JI45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI45_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.640e-19
Identity = 64/111 (57.66%), Postives = 70/111 (63.06%), Query Frame = 0 
Query:   23 ISSWRNTWQGLMSSRSSRGRTRVQGAGASTSPTGAAQQNRQHQ--SATARWSGSRGTLTPSDQGTGSVSNSSTSTGRIAADVLSQPTTVSAESDFSLSEVFAGAVSPAGLA 131
            IS+WRNTWQGLMS  SSRGR+R Q  G ++SP+  +         SATARWS  R                   TGRI ADVLS PT VSAESDFSLSEVFAGAVSPAGLA
Sbjct: 1394 ISAWRNTWQGLMSVGSSRGRSRTQTGGTASSPSRQSXXXXXXXXXSATARWSSPRDAPATXXXXXXXXXXXXXXTGRIVADVLSHPTIVSAESDFSLSEVFAGAVSPAGLA 1504
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BLAST of mRNA_H-canaliculatus_F_contig10593.574.1 vs. uniprot
Match: D8LTM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM1_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 4.230e-8
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:   23 ISSWRNTWQGLMSSRSSRGRTRVQGAGASTSPTGAAQ--QNRQHQSATARWSGSR 75
            IS+WRNTWQGLMS  SSRGR+R Q  G ++SP   +Q  Q+RQHQSATARWS  R
Sbjct: 1141 ISAWRNTWQGLMSVGSSRGRSRTQTGGTASSPLRQSQSSQHRQHQSATARWSSPR 1195
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10593.574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI45_9PHAE1.640e-1957.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTM1_ECTSI4.230e-865.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10593contigH-canaliculatus_F_contig10593:86..1953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10593.574.1mRNA_H-canaliculatus_F_contig10593.574.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10593 85..1953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10593.574.1 ID=prot_H-canaliculatus_F_contig10593.574.1|Name=mRNA_H-canaliculatus_F_contig10593.574.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=146bp
GDLSPEAGHERQRSGGGGGGGGISSWRNTWQGLMSSRSSRGRTRVQGAGA
STSPTGAAQQNRQHQSATARWSGSRGTLTPSDQGTGSVSNSSTSTGRIAA
DVLSQPTTVSAESDFSLSEVFAGAVSPAGLAEKRQRRRCRWQRGSR
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