prot_H-canaliculatus_F_contig10592.573.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10592.573.1
Unique Nameprot_H-canaliculatus_F_contig10592.573.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length282
Homology
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 5.780e-117
Identity = 216/288 (75.00%), Postives = 239/288 (82.99%), Query Frame = 0
Query:    1 MTRRQSSRPTAVLLGAMSFLGRCRALSTAT------AASAVVRPLVSSTSPAAGAGRRSGMLGFLSPAAIAQHRSSAGRMSSPSPSSLLRSCSSSSCSLSSFARPSPSRASRVAIAASSPSRRRRRTALGMVSDRPFRGPEAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            M RRQ +RPTAV+LGAMSFLGRCRALS AT      AA+AVVRP+++S++     GR  GMLGF  PAA     S  G  SSP P SLL S S+SSCS   FAR   S A RVA  A+SPSRRRRRTALGMVSDRPFRGPEAE +EE+DFTGLGLLDDLV AM+EFGF+SPSKIQRKAIPQIL+GGNVVFAA+TGSGKTLAYLMPL+QQL+ +EAQAE  G+SIRQTKRPRAI+LVPTRELA QVLEVAKRLSR+CKFSSCGVVGGEDYGKQRQRLA TVD+VV TPG
Sbjct:    1 MKRRQPNRPTAVILGAMSFLGRCRALSVATGPTTSAAAAAVVRPVLTSST-----GRPCGMLGFC-PAAQHYRNSRWGSTSSP-PVSLLHS-SASSCS---FAR--TSEALRVAAVAASPSRRRRRTALGMVSDRPFRGPEAEAIEEVDFTGLGLLDDLVDAMEEFGFNSPSKIQRKAIPQILNGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPG 275          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 2.170e-87
Identity = 138/158 (87.34%), Postives = 151/158 (95.57%), Query Frame = 0
Query:  125 MVSDRPFRGPEAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            MVSDRPFRGPEA+V+EEMDFTGLGLLDDLV AM+EFGFDSPSKIQRKAIPQIL+GGN+VFAA+TGSGKTLAYLMPL+QQL+ +EAQAE  G+SIRQTKRPRAI+LVPTRELA QVLEVAKRLSR+CKFSSCGVVGGEDYGKQRQRLA TVD+VV TPG
Sbjct:    1 MVSDRPFRGPEADVIEEMDFTGLGLLDDLVDAMEEFGFDSPSKIQRKAIPQILNGGNIVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAMQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPG 158          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A7S2V6I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6I9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.020e-48
Identity = 93/159 (58.49%), Postives = 112/159 (70.44%), Query Frame = 0
Query:  134 PEAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGD----------SIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            PE      + F  LGL  ++  +M+  GF  PSKIQ  AIPQ+++GGN+VFAAATGSGKTLAYL+P++QQLRAQEA AE   +          S+R  KRPRA++LVPTRELA QVL V K++ R  K S C VVGGEDYGKQ + LA TVDLVVATPG
Sbjct:   99 PEESNDPSLTFGRLGLDQEITQSMEAMGFTRPSKIQAMAIPQVMTGGNMVFAAATGSGKTLAYLLPVIQQLRAQEAVAEACAEAAMQRGEVGLSVRAPKRPRAVVLVPTRELAAQVLAVTKQIGRYAKVSCCSVVGGEDYGKQARALAGTVDLVVATPG 257          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.010e-45
Identity = 85/157 (54.14%), Postives = 117/157 (74.52%), Query Frame = 0
Query:  126 VSDRPFRGPEAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            +SD+PF  P +      +++ LGLL ++ GA+D  GF +PS IQR AIPQI SGGN+V AAATGSGKTLAYL+P++  L++QE   ++   ++R+  RPRA++LVPTRELA QVL V K+++ T K SSCG+ GGEDYGKQ++ LA+  D+VV +PG
Sbjct:    3 ISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQE---QLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPG 156          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A7S2WDP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDP9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.960e-40
Identity = 85/150 (56.67%), Postives = 108/150 (72.00%), Query Frame = 0
Query:  133 GPEAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            G  A   + ++F  LGL++ LV  + + GF +PS IQ+ A+PQ L   N+ FAA+TGSGKTLAYL+P VQ L+ QE   E++G   R  KRPRA++LVPTRELA QVL VAKRLS   KFSSC VVGG D+G+QR+ LA  VD+VVA+PG
Sbjct:   70 GDGAGPSDMLEFRRLGLVEPLVKGLADMGFTAPSPIQQAAVPQALQKQNLAFAASTGSGKTLAYLLPTVQALKVQE---ELEGFE-RAPKRPRALVLVPTRELAVQVLSVAKRLSHNAKFSSCAVVGGGDHGQQRRALAGVVDVVVASPG 215          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.180e-38
Identity = 88/173 (50.87%), Postives = 112/173 (64.74%), Query Frame = 0
Query:  122 ALGMVSDRPFRGP------------EAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            A G +S +PF  P            E    +  +F  LGL ++ +  + + G   PS IQR AIP  L G +V F+A+TGSGKTLAYL+P++Q+L+ QEA   ++G   RQT RPRA+ILVPTREL TQVLEV K LS   K SSCG+ GGED+G QR+RL   VDLVVA+PG
Sbjct:   97 AFGGISSQPFSTPATPPKTTSRSGDENAACDLAEFRRLGLGEETLEGLRKLGIKEPSVIQRLAIPAALKGDDVAFSASTGSGKTLAYLLPIMQELKWQEA---VEGKE-RQTCRPRALILVPTRELVTQVLEVIKSLSHVIKLSSCGLHGGEDFGVQRRRLGGMVDLVVASPG 265          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: F0XZ71_AURAN (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ71_AURAN)

HSP 1 Score: 135 bits (341), Expect = 9.800e-36
Identity = 77/158 (48.73%), Postives = 106/158 (67.09%), Query Frame = 0
Query:  130 PFRGPEAEVMEEMDFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSI---RQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGED-YGKQRQRLAST-VDLVVATPG 282
            P R   A  ++   +  LGL + LV A++     +PS+IQ+ AIP++L   +V+FAA TGSGKTLAYL+P++ +L+A+E  A   GD +   RQ +RPRA++LVPTRELA QVL+VAK ++  CK S  G  GG D  GKQR +L S   D++VATPG
Sbjct:   31 PLRSLAASEIQREGWGALGLYEGLVDAVETLELTAPSEIQKLAIPRVLGREDVMFAAETGSGKTLAYLLPVLSRLKAEEFAALSAGDGLGDLRQPRRPRAVVLVPTRELAAQVLQVAKSVAHVCKASCRGCFGGSDGVGKQRAKLGSAPYDILVATPG 188          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A0G4F3L1_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3L1_VITBC)

HSP 1 Score: 142 bits (358), Expect = 1.730e-34
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 0
Query:  147 LGLLDDLV-GAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            LGL + +  G     G   P+ IQR AIPQ+LSGGN+VFAA TGSGKTLAYL+P++Q L+++E    +DG S+R+ KRPRA+IL PTREL+ QVLEV +  S+  K SSC V+GG+ + KQ++ L+  +D+VV TPG
Sbjct:  849 LGLEESIARGTASMLGDVEPTAIQRLAIPQVLSGGNIVFAAETGSGKTLAYLLPMMQHLKSEE----LDGRSLRRPKRPRALILSPTRELSQQVLEVLRGSSQLAKLSSCSVIGGDSFAKQKRDLSKILDVVVGTPG 981          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A6H5JYW5_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW5_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.120e-34
Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 0
Query:  209 AQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            AQAE  G+SIRQTKRPRAI+LVPTRELA QVLEVAKRLSR+CKFSSCGVVGGEDYGKQRQRLA TVD+VV TPG
Sbjct:    7 AQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPG 80          
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Match: A0A7S2FKV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKV5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 5.530e-33
Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 0
Query:  143 DFTGLGLLDDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPLVQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTCKFSSCGVVGGEDYGKQRQRLASTVDLVVATPG 282
            +F  LGL + L+ A+ +     PS IQR A+PQ+L G N+  AA+TGSGKTLAYL+P+VQ L+ QE     D    R  KRPR ++LVPTRELATQVL VAK L    KFSSC +VGG D G+QR+ L    D+ VA+ G
Sbjct:   40 EFRKLGLTEGLLEAVADLELKEPSSIQRAAVPQVLQGQNIALAASTGSGKTLAYLLPIVQALKIQE-----DMGYDRLAKRPRVLVLVPTRELATQVLSVAKHLGHYSKFSSCCIVGGGDNGQQRRALTGVQDVCVASAG 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10592.573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY63_9PHAE5.780e-11775.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZQ1_ECTSI2.170e-8787.34DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S2V6I9_9STRA2.020e-4858.49Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A836CEI1_9STRA1.010e-4554.14DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2WDP9_9STRA1.960e-4056.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D2M2_9STRA3.180e-3850.87Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
F0XZ71_AURAN9.800e-3648.73Helicase ATP-binding domain-containing protein (Fr... [more]
A0A0G4F3L1_VITBC1.730e-3454.01Uncharacterized protein n=4 Tax=Vitrella brassicaf... [more]
A0A6H5JYW5_9PHAE2.120e-3487.84Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S2FKV5_9STRA5.530e-3352.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 161..282
e-value: 0.0044
score: 20.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 173..282
score: 17.299
NoneNo IPR availableGENE3D3.40.50.300coord: 127..282
e-value: 4.4E-44
score: 152.5
NoneNo IPR availablePANTHERPTHR24031:SF572DEAD-BOX ATP-DEPENDENT RNA HELICASE 40coord: 142..282
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 142..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.632
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 167..282
e-value: 2.9E-28
score: 98.8
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 142..170
score: 8.578
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 136..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10592contigH-canaliculatus_F_contig10592:2226..4563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10592.573.1mRNA_H-canaliculatus_F_contig10592.573.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10592 2226..4563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10592.573.1 ID=prot_H-canaliculatus_F_contig10592.573.1|Name=mRNA_H-canaliculatus_F_contig10592.573.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=282bp
MTRRQSSRPTAVLLGAMSFLGRCRALSTATAASAVVRPLVSSTSPAAGAG
RRSGMLGFLSPAAIAQHRSSAGRMSSPSPSSLLRSCSSSSCSLSSFARPS
PSRASRVAIAASSPSRRRRRTALGMVSDRPFRGPEAEVMEEMDFTGLGLL
DDLVGAMDEFGFDSPSKIQRKAIPQILSGGNVVFAAATGSGKTLAYLMPL
VQQLRAQEAQAEIDGDSIRQTKRPRAIILVPTRELATQVLEVAKRLSRTC
KFSSCGVVGGEDYGKQRQRLASTVDLVVATPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd