prot_H-canaliculatus_F_contig10333.346.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10333.346.1
Unique Nameprot_H-canaliculatus_F_contig10333.346.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length670
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10333.346.1 vs. uniprot
Match: A0A6H5K2Z4_9PHAE (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z4_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.780e-56
Identity = 142/192 (73.96%), Postives = 148/192 (77.08%), Query Frame = 0 
Query:  479 REDALTARLLVAEELLLERERQLESTNLAMAEIMQNSXXXXXXXEARAAGETTLADLRAKHQREVSRLEGLVAAEKRKGKAAADAVRSWETKAEEFQEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGELRGVQQDRDSLAKEKLALQTSLAGLREQLRAKDEERATQTQSLAAMGAVSQASSHRLSTTEK 670
            REDAL ARLLVAEELLLERERQLESTNLAMAEIMQN    XXXX           DLR +H REVSRLEGL+ AEKRKGKAAADAVRSWETKAEEF+EKDKMLKAYMDEGAMLAFKQSEMEKTVRKARG LRGVQ++RDSLAKE  ALQ                     QSLAAMGAVSQASSHRL+T EK
Sbjct:  695 REDALMARLLVAEELLLERERQLESTNLAMAEIMQNGGKAXXXXXXXXXXXXXXXDLRDRHAREVSRLEGLIEAEKRKGKAAADAVRSWETKAEEFEEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGALRGVQEERDSLAKENTALQAXXXXXXXXXXXXXXXXXXXXQSLAAMGAVSQASSHRLNTAEK 886
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10333.346.1 vs. uniprot
Match: D7G6G4_ECTSI (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G4_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 2.850e-49
Identity = 113/141 (80.14%), Postives = 121/141 (85.82%), Query Frame = 0 
Query:  479 REDALTARLLVAEELLLERERQLESTNLAMAEIMQNSXXXXXXXEARAAGETTLADLRAKHQREVSRLEGLVAAEKRKGKAAADAVRSWETKAEEFQEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGELRGVQQDRDSL 619
            REDALTARLLVAEELLLERERQLESTNLAMAEIMQN        +    G   +ADLR +H +EVSRLE LV AE+RKGKAAADAVRSWETKAEEF+EKDKMLKAYMDEGAMLAFKQSEMEKTVRKARG LRGVQ++RDSL
Sbjct:  705 REDALTARLLVAEELLLERERQLESTNLAMAEIMQNGSKAGSAGDGSDGGAAAVADLRGQHAQEVSRLEDLVEAERRKGKAAADAVRSWETKAEEFEEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGALRGVQEERDSL 845
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10333.346.1 vs. uniprot
Match: A0A7R9U5L0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5L0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.120e-5
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:  571 AEEFQEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGELRGVQQDRDSLAKEKLALQTSLAGLREQLRAKDEERATQTQSLAAMGAVSQASSHRLSTTE 669
            A E +E    L A+M+E   LA KQSE+E+  RKARGELRGVQ +RD L KE   L+  +  L +QLR   +      ++L+A+   SQ +S RL+  E
Sbjct:  113 AAEGREASVKLAAFMEESQALAIKQSELEQITRKARGELRGVQSERDELGKENEILRERIMELEKQLRMMQQSEHQSKKNLSAVQVQSQVTSGRLAQLE 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10333.346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K2Z4_9PHAE1.780e-5673.96TMF_TATA_bd domain-containing protein n=1 Tax=Ecto... [more]
D7G6G4_ECTSI2.850e-4980.14TMF_TATA_bd domain-containing protein n=1 Tax=Ecto... [more]
A0A7R9U5L0_9STRA6.120e-543.43Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 536..556
NoneNo IPR availableCOILSCoilCoilcoord: 602..622

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10333contigH-canaliculatus_F_contig10333:615..4438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10333.346.1mRNA_H-canaliculatus_F_contig10333.346.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10333 615..4438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10333.346.1 ID=prot_H-canaliculatus_F_contig10333.346.1|Name=mRNA_H-canaliculatus_F_contig10333.346.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=670bp
VRRLPTSPELSATPATANGSVDNSGDRTLVPSPLSLGQEPEEEAAAGRSE
GAAGDAAASAAAAPSPTAFGGTGKGSAGDGAEDGGAAEAGEERGYGASEK
LPALSPGVMGLDEAAAAAAAAAAGSNATAGGGGWGDVSLGDSDDDENDYT
GVPQGGPQSVAGQPPEAAAAHAGGSLPVEAGSSTVGEALPATPAAAEKGG
GEVGLGADDGAQGPSFAGADSAADAVGGLGPSEDGPARGEEGEAGERVAG
GEGGGSGGGGGGLPPEKAQEGREEVGETRTLCSGGGVAADGTPALTEQDG
GGGDGDGEIRGVCQEDGEDDVDSAAPGGEASSATEATEEGGTQQPTVPLE
SILDLEADEPEPGDAVDEEGDDTDGDTDGEAAGAEPEPEAAAATAAAAFE
GETGMGREGSLEGSGVLLSAGGDDADAGVGVGASGGMADLAPTDSGPDAP
AAADQAATTASTTSNAEAAVAAASAAREREDALTARLLVAEELLLERERQ
LESTNLAMAEIMQNSGGGGGGGEARAAGETTLADLRAKHQREVSRLEGLV
AAEKRKGKAAADAVRSWETKAEEFQEKDKMLKAYMDEGAMLAFKQSEMEK
TVRKARGELRGVQQDRDSLAKEKLALQTSLAGLREQLRAKDEERATQTQS
LAAMGAVSQASSHRLSTTEK
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