prot_H-canaliculatus_F_contig1017.197.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1017.197.1
Unique Nameprot_H-canaliculatus_F_contig1017.197.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length620
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1017.197.1 vs. uniprot
Match: D8LU63_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU63_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.370e-28
Identity = 197/482 (40.87%), Postives = 232/482 (48.13%), Query Frame = 0 
Query:  178 RTGAQLDFHGNVRMDVPFLMDGAFLEK--GDTGDAALS--VDSGQAELRSILLGTL-DAEDEEDASPDAKLKAATKSFASRTYRGGRTLVGLDTSASNANANETARPPTGISSXXXXXXXXXXXTSMGPGRLFPASTGXXXXXXXXXXXXXXXNGPFES--VIAGGGG---GTGLSGETYADFGLDNLPELTSNDFTGLAAFDTG--GAHLAREAHQQHN-----TLPRQPDSPNFAAATSGSYAPSFVNVRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLVAAKMPA-----------------EEAWWDILEGEEFVAMPEPVWGVA--LDAQSVEEESLRGNPRG--WQRGGGG--AAERSRGMTENMDISSPGLGGDELGGGHAPGRXXXXXXXSAAAVPSYLSKSRPLLPPCSSSLTVT--AAGLGGVLVGPGDECFAGDSSRGNRRDRNCEV 617
            R    + F G+ RMD  FLMDG    +  G  G A+L   VD+G+AELRSILLG   D  +  D+  D  L  A  S ++R  +    +  +         +E  RP  G+                G GR   AS G                  FES   +A GGG       +   + DFGLD+LPEL+SNDF GL   +TG    +L R   Q H      T  R P     AA  +G ++ S   VRLG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          EEAWW++LEGEEFVAMPEP WG A  LD QS+ EE  R NPRG  W+  GGG    E +RGM E+               G  P         S AA    LS         SSS+T    AAGLGGV+V PGDE F+GD S  +   RN  V
Sbjct:  360 RVAVDISFRGDTRMDGSFLMDGGSFGETSGGAGGASLGAGVDTGRAELRSILLGDAGDTPEVRDSVADGGLSFAVPSSSARVAKPAPGVQAV---------HEALRPAGGL----------------GFGRDSAASRGGEHAGARSS---------FESGGSLASGGGTAPAPAPAAGVFVDFGLDHLPELSSNDFAGLGGVETGVCANYLPRVTLQHHRYHQQRTASRGPYDLAGAAVAAGVFS-SCEGVRLGSDSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAWWEVLEGEEFVAMPEPTWGGAGGLDTQSMMEEPFRTNPRGCGWRSDGGGRGGVETNRGMAES---------------GRGPHGDGGRTVASHAATARSLSLD-------SSSITAATAAAGLGGVVVMPGDEGFSGDMSGRDSCGRNGGV 784
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1017.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU63_ECTSI3.370e-2840.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1017contigH-canaliculatus_F_contig1017:29566..31425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1017.197.1mRNA_H-canaliculatus_F_contig1017.197.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1017 29566..31425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1017.197.1 ID=prot_H-canaliculatus_F_contig1017.197.1|Name=mRNA_H-canaliculatus_F_contig1017.197.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=620bp
VRRPSYLHREEVGSDGDRAARFGNAGGGGGGNSSGRGNATGGGGDRFKSA
KTEERKPASVPPSLVPLAKRGEDLEAAGAGASSNTCPDAGNLGCGSGRVR
PRGGGTGLGQAAASVTAGLLEPRQGSGVSTSSSRGGGGSGDGGKAAKFHT
RFPAAGGGREGGGRGAGQAEAGVGKVKRTGAQLDFHGNVRMDVPFLMDGA
FLEKGDTGDAALSVDSGQAELRSILLGTLDAEDEEDASPDAKLKAATKSF
ASRTYRGGRTLVGLDTSASNANANETARPPTGISSSSTSSTSCCSSTSMG
PGRLFPASTGTGTGTGTGRGTGTGTNGPFESVIAGGGGGTGLSGETYADF
GLDNLPELTSNDFTGLAAFDTGGAHLAREAHQQHNTLPRQPDSPNFAAAT
SGSYAPSFVNVRLGGGGSLPPMESSSGVSDDVSSEAFSSSDGSSSVSVAA
AGGEGSAGGASSDTLVAAKMPAEEAWWDILEGEEFVAMPEPVWGVALDAQ
SVEEESLRGNPRGWQRGGGGAAERSRGMTENMDISSPGLGGDELGGGHAP
GRGAAPSEGSAAAVPSYLSKSRPLLPPCSSSLTVTAAGLGGVLVGPGDEC
FAGDSSRGNRRDRNCEVGRG
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