prot_H-canaliculatus_F_contig10133.158.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 1.000e-138 Identity = 220/261 (84.29%), Postives = 232/261 (88.89%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGG--------KSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLLAKMEYRENVAETRAA 253 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYN++ ERHLR SAL TLTRPSVLITDAHNALTGG RK RE LISTVMDTVRGGGNVLLPTDTAGRVLELLVLL+D+WQKHRLG+YKLVLLHNTAFNT EFAKSQ LEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELG+DPKVV+ATDMSLD+GFSKALLLRWASGGANTILLTGRGHG+TTAR L+AK EYR++ A RAA Sbjct: 265 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQ-------LEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAA 518
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 298 bits (763), Expect = 3.560e-91 Identity = 152/239 (63.60%), Postives = 181/239 (75.73%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALT-GGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLL 238 GRGAGVTITPYAAG +IG ++WR+ WQT+DNDIVYA +YNH RE HL A+ TL+RPS++ITDAH LT K + R + L V TVR GGNVLLP DTAGRVLELL+LLD HW +++LG+Y LVLLH+ AFNT EFAKSQ LEWMS+ I + FDLQRSNPFE+R+V + HSLEEL LG P VVLATD+SLD+GF+KALLL WA+ N +LLT RGHG + AR LL Sbjct: 191 GRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQ-------LEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELL 422
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO) HSP 1 Score: 232 bits (591), Expect = 4.710e-67 Identity = 120/242 (49.59%), Postives = 161/242 (66.53%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLLAKME 242 G+G G+TITP+ AG +G WR++ + ED I+YA YNH +ERHL +AL T RP+VLITDA+N LT SRK R+ L++ VM T+R GGNVL+P DTA RVLELL++LD HW+ ++G Y LVLL+N A+N EFAKS LE+M+ DI ++F+ R N F+ +NVH+ HSLEEL+EL + PKVVLA+ SL+ G + LL+ WAS N IL R T + + M+ Sbjct: 150 GKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSM-------LEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGTLSSFIQTYMD 382
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: L8GYA6_ACACA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYA6_ACACA) HSP 1 Score: 231 bits (590), Expect = 1.760e-66 Identity = 120/240 (50.00%), Postives = 159/240 (66.25%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLLAK 240 GRGAG+ +TPY G MIG VW+++ +TE+ I+YA YNH +ERHL P+ L TL RP++LITDA N L+ SR+ R+ L+ T M T++G GNVLLPTDTAGRVLELL+ D HW +RL Y LVLL A+NT EFAKSQ LEWMS + ++FDL R NPFE + V + HS+EEL+ L P VVLAT SL++GF++ L + W+S + ++ T R T +L + Sbjct: 103 GRGAGIELTPYVGGHMIGGTVWKITKETEE--ILYAVDYNHKKERHLNPTVLETLNRPTLLITDAFNGLSTQSSRRSRDMDLLDTTMKTLKGDGNVLLPTDTAGRVLELLLTFDQHWAYYRLSQYGLVLLEKQAYNTIEFAKSQ-------LEWMSTAVQKSFDLDRVNPFEFKFVRLCHSVEELEALPK-PLVVLATTASLEWGFARDLFVEWSSNPRHAVIFTDRPQPGTLGHLVLTQ 332
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A0A7S0N1Z8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1Z8_9CHLO) HSP 1 Score: 209 bits (532), Expect = 5.920e-61 Identity = 107/235 (45.53%), Postives = 153/235 (65.11%), Query Frame = 0 Query: 4 AGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLL 238 A VT+TPY AG ++G +W++S +TED +VYA +NH +ERHL + L + RPS+LITDA NA +R R+ L TV +RGGG+VL+P DTAGRVLEL++ L+ +W +L +YKLVLL N A+NT EFAKS +EWM++ I FD R+N F+ R++H+ HS+EEL LG PK+V+A+ SL+ G ++ L + WA+ N +L G +T AR ++ Sbjct: 149 AAVTVTPYNAGHLLGGTLWKISKETED--VVYAVDFNHKKERHLNGTVLESFNRPSLLITDAFNAANRPPARAARDKELTDTVAKVLRGGGSVLIPIDTAGRVLELVLHLEQYWTVAKLASYKLVLLTNVAYNTMEFAKSH-------IEWMNDAISTTFDQTRTNAFKTRHLHLCHSVEELAGLGPGPKLVMASMQSLEVGPARELFVTWATNPRNLLLFPDMGQPNTLAREVM 374
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA) HSP 1 Score: 211 bits (536), Expect = 4.940e-59 Identity = 115/238 (48.32%), Postives = 153/238 (64.29%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLL 238 G+G + ITPYAAG +IG +W++ +T++ I+YA YNH +ERHL P+ L TLT+P++LITDA NAL SR R++ LI ++ T+R GGNVLLP DTAGRVLELLV+LD HW H +Y L+ L+N A+NT EFAKSQ LEWMSE I F R N F+ NV + H E++E + PKVVLA+ SL+ GF++ + + W S N I+ T T AR L+ Sbjct: 139 GKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQ-------LEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEFPS-PKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLM 365
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A7RPX1_NEMVE (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RPX1_NEMVE) HSP 1 Score: 210 bits (535), Expect = 5.800e-59 Identity = 113/253 (44.66%), Postives = 161/253 (63.64%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQK--HRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLLAKMEYRENVAETR 251 G+G G+TITPYAAG MIG +W++ E+ DI+YA YNH +ERHL + L TL+RPS+LITD+ NAL R+ R+ +L+ ++ T+R GNV++ DTAGRVLEL LLD W+ L Y L +L+N ++N EFAKSQ +EWMS+ I +AF++ R+NP++ R H+ HSL +L + +PKVVLA+ M L GFS+ L + WA NT++ T R T AR L+ +E ++ E + Sbjct: 139 GKGHGITITPYAAGHMIGGTMWKIVKDGEE-DIIYAVDYNHKKERHLNGAVLETLSRPSLLITDSFNALNIQTRRRERDTQLMGEILKTMRRHGNVMIAIDTAGRVLELSQLLDQLWRNLDSGLSAYSLAMLNNVSYNVIEFAKSQ-------VEWMSDKIMKAFEIGRNNPYQFRYCHLCHSLADLARVP-EPKVVLASMMDLTAGFSRDLFVEWADNPKNTVIFTARSSPGTLARTLIDNLELKQVELEVK 382
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A0A2R6XNT6_MARPO (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XNT6_MARPO) HSP 1 Score: 210 bits (535), Expect = 6.430e-59 Identity = 110/240 (45.83%), Postives = 157/240 (65.42%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLLAK 240 G+G G+TITPYAAGR++G VW+++ TED I+YA +NH +ERHL + L + RP+VLITD++NAL +K R+A + VM +R GGNVLLP +TAGRVLEL++ LD W +L NY + LL N +++T EFAKS LEWMS+ I ++F+ R N F L+ + + H+ ++LD+L PKVV A+ SL+ GF++ L + WA+ N +L T RG T +R L A+ Sbjct: 156 GKGEGITITPYAAGRLLGGTVWKITVDTED--IIYAVDFNHRKERHLNGTVLQSFVRPAVLITDSYNALNNQPLQKQRDAEFLDVVMKALRAGGNVLLPVETAGRVLELVLYLDKCWAGDKL-NYPMALLTNVSYSTLEFAKSL-------LEWMSDAIAKSFEHTRDNSFVLKYLKLCHTRKDLDDLPAGPKVVFASMASLEAGFARELFVEWATDPNNLVLFTERGQVGTLSRKLQAE 385
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: A0A388KIQ1_CHABU (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388KIQ1_CHABU) HSP 1 Score: 207 bits (528), Expect = 4.340e-58 Identity = 110/241 (45.64%), Postives = 155/241 (64.32%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHRLGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDE-LGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLLAK 240 G+G G+TIT YAAG ++G VW+++ TED I+YA Y+H +ERHL + L T RP+VLITDA+NAL+ +K R+ I ++M T+RG G+VL+P +TAGRVLEL++ L+ HW RL Y LV L + +++T + AKS LEWMS+ I + FD R N FE++ +++ HS EE D L P+VVLA+ SL+ GF++ L + WA N +L T RG T AR L A+ Sbjct: 140 GKGEGITITAYAAGHLLGGTVWKITKDTED--IIYAVDYHHRKERHLSGTVLETFVRPAVLITDAYNALSNQAFKKERDHLFIDSIMSTLRGNGSVLIPVETAGRVLELILYLEQHWATERLA-YPLVFLTHVSYHTIDTAKSS-------LEWMSDTISKTFDTSRDNAFEVKYINLKHSREEFDSMLTKGPQVVLASTASLEAGFARDLFVEWAGDPKNLVLFTERGPAGTLARVLQAE 370
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Match: B3S6C6_TRIAD (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Trichoplax TaxID=10227 RepID=B3S6C6_TRIAD) HSP 1 Score: 208 bits (529), Expect = 4.620e-58 Identity = 112/239 (46.86%), Postives = 154/239 (64.44%), Query Frame = 0 Query: 1 GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLTRPSVLITDAHNALTGGKSRKWREARLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDDHWQKHR-LGNYKLVLLHNTAFNTSEFAKSQASKQGFRLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLLRWASGGANTILLTGRGHGSTTARNLL 238 G+G G+TITPYAAG M+G +W++ E+ DI+YA YNH +ERHL S L TLT PS+LITDA+NA R+ R+ +LIS V++ +R GGNVL+ DTAGRVLEL +LLD W+K L Y + LL++ ++N EFAKSQ +EWM + + AF+ R+NPF+ + + + HSL EL L +PKVVLA+ L GF++ L L+WA N + TGR T R++L Sbjct: 139 GKGNGLTITPYAAGHMVGGTIWKIIKDGEE-DIIYAVDYNHKKERHLNGSVLETLTHPSLLITDAYNAQYNQAKRRDRDQKLISRVLNALRSGGNVLIAVDTAGRVLELSLLLDHLWRKDPGLSAYPIALLNHVSYNVVEFAKSQ-------VEWMCDKVLVAFEDNRNNPFQFKYIQLCHSLNELSGLP-EPKVVLASSPDLTCGFARDLFLQWAGNSKNLTIFTGRSSPGTLGRHIL 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10133.158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-canaliculatus_F_contig10133.158.1 ID=prot_H-canaliculatus_F_contig10133.158.1|Name=mRNA_H-canaliculatus_F_contig10133.158.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=309bpback to top |